Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 201 - 300:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig00201 kiaa0979 protein 240 20 6.50E-38 97.30% 5 F:binding; P:negative regulation of cell proliferation; C:nucleus; P:cell division; P:mitotic sister chromatid cohesion    
contig00202 cathepsin l 1072 20 0 92.25% 3 F:cathepsin L activity; P:proteolysis; F:endopeptidase inhibitor activity EC:3.4.22.15  
contig00203 ---NA--- 625 0     0      
contig00204 ---NA--- 162 0     0      
contig00205 zygote arrest 1 1153 20 3.91E-114 74.50% 2 C:cytoplasm; P:multicellular organismal development    
contig00206 cob alamin adenosyltransferase 795 20 1.72E-79 84.35% 4 P:cobalamin biosynthetic process; F:cob(I)yrinic acid a,c-diamide adenosyltransferase activity; F:ATP binding; C:mitochondrion EC:2.5.1.17  
contig00207 dead (asp-glu-ala-asp) box polypeptide 20 714 20 4.24E-28 60.90% 4 F:helicase activity; F:hydrolase activity; C:nucleus; F:nucleotide binding    
contig00208 heterogeneous nuclear ribonucleoprotein a0 639 20 9.42E-31 72.55% 1 F:binding    
contig00209 ---NA--- 1185 0     0      
contig00210 ---NA--- 235 0     0      
contig00211 ---NA--- 616 0     0      
contig00212 jumonji domain containing 7 422 20 8.32E-49 83.45% 2 F:F; P:P    
contig00213 ---NA--- 137 0     0      
contig00214 ubiquitin associated protein 2 809 20 5.68E-46 69.55% 2 F:F; P:P    
contig00215 ---NA--- 153 0     0      
contig00216 stathmin 1 oncoprotein 18 variant 8 964 20 3.12E-63 92.00% 8 P:negative regulation of microtubule polymerization; P:microtubule depolymerization; C:microtubule; P:mitotic spindle organization; P:positive regulation of cellular component movement; P:axonogenesis; F:tubulin binding;    
contig00217 ---NA--- 235 0     0      
contig00218 ---NA--- 717 0     0      
contig00219 thioredoxin 2 973 20 6.67E-29 91.00% 7 P:cell redox homeostasis; F:thiol-disulfide exchange intermediate activity; F:electron carrier activity; C:mitochondrion; F:protein disulfide oxidoreductase activity; P:glycerol ether metabolic process; P:transport    
contig00220 malate dehydrogenase nad 1553 20 5.23E-179 92.85% 9 F:L-malate dehydrogenase activity; C:mitochondrial inner membrane; F:protein self-association; P:malate metabolic process; P:tricarboxylic acid cycle intermediate metabolic process; F:malate dehydrogenase (NADP+) activity; P:tricarboxylic acid cycle; P:glycolysis; C:mitochondrial matrix EC:1.1.1.37; EC:1.1.1.82  
contig00221 atp synthase mitochondrial f1 complex assembly factor 2 1473 20 5.89E-124 87.15% 4 F:protein binding; C:nuclear speck; P:proton-transporting ATP synthase complex assembly; C:mitochondrion    
contig00222 selenoprotein m 497 20 9.95E-50 80.85% 5 P:negative regulation of signal transduction; F:selenium binding; C:endoplasmic reticulum; C:signal recognition particle, endoplasmic reticulum targeting; C:Golgi apparatus EC:3.6.5.4  
contig00223 caprin2 protein 1166 20 2.52E-76 91.00% 2 P:negative regulation of cell growth; C:mitochondrion    
contig00224 ---NA--- 873 0     0      
contig00225 ---NA--- 123 0     0      
contig00226 targeting protein for xklp2 2389 20 0 60.95% 4 F:purine ribonucleotide binding; F:protein binding; P:cellular process; C:spindle pole    
contig00227 ---NA--- 934 0     0      
contig00228 ---NA--- 441 0     0      
contig00229 ---NA--- 153 0     0      
contig00230 topoisomerase iii beta 552 20 8.59E-60 81.00% 5 F:DNA topoisomerase type I activity; P:DNA modification; P:DNA unwinding involved in replication; C:chromosome; P:DNA topological change EC:5.99.1.2  
contig00231 epididymal secretory protein e1 precursor 728 20 1.54E-73 84.75% 7 P:cholesterol homeostasis; C:lysosome; P:intracellular cholesterol transport; C:signal recognition particle, endoplasmic reticulum targeting; F:enzyme binding; C:extracellular region; F:cholesterol binding EC:3.6.5.4  
contig00232 eukaryotic translation initiation factor 1b 920 20 7.66E-48 94.70% 3 F:protein binding; P:regulation of translational initiation; F:translation initiation factor activity    
contig00233 ---NA--- 387 0     0      
contig00234 beta-actin 1725 20 0 99.50% 5 C:cytoskeleton; C:cytoplasm; F:ATP binding; F:structural molecule activity; F:protein binding    
contig00235 rna (guanine-7-) methyltransferase 629 20 8.24E-93 79.15% 6 C:mRNA cap binding complex; F:mRNA (guanine-N7-)-methyltransferase activity; P:mRNA capping; F:RNA binding; F:protein binding; C:nucleus EC:2.1.1.56  
contig00236 processing of precursor 7 354 20 7.74E-31 77.70% 5 F:nucleic acid binding; F:protein binding; C:nucleolar ribonuclease P complex; F:ribonuclease P activity; P:tRNA processing EC:3.1.26.5  
contig00237 egg envelope component zpax 1009 20 5.05E-51 49.05% 3 F:F; P:P; C:viral envelope    
contig00238 small nuclear ribonucleoprotein sm d3 673 20 1.01E-57 95.65% 7 C:cytoplasm; P:RNA splicing; F:nucleic acid binding; C:spliceosomal complex; F:protein binding; C:small nuclear ribonucleoprotein complex; P:mRNA processing    
contig00239 small nuclear ribonucleoprotein polypeptide a 556 20 1.77E-44 91.25% 4 C:U2 snRNP; F:RNA binding; F:protein binding; P:nuclear mRNA splicing, via spliceosome    
contig00240 ---NA--- 266 0     0      
contig00241 solute carrier family 7 (cationic amino acid y+ system) member 2 186 20 1.35E-14 85.45% 13 F:L-ornithine transmembrane transporter activity; P:regulation of inflammatory response; F:high affinity arginine transmembrane transporter activity; P:production of nitric oxide involved in inflammatory response; P:L-amino acid transport; F:L-lysine transmembrane transporter activity; C:plasma membrane; P:macrophage activation; P:nitric oxide biosynthetic process; P:ornithine transport; C:integral to membrane; P:lysine transport; P:arginine transport    
contig00242 vesicle-associated membrane associated protein b and c 587 20 2.67E-44 79.40% 13 C:endoplasmic reticulum membrane; P:endoplasmic reticulum unfolded protein response; C:membrane fraction; C:Golgi apparatus; C:plasma membrane; F:beta-tubulin binding; P:positive regulation of viral genome replication; P:virus-host interaction; F:enzyme binding; C:integral to membrane; F:protein heterodimerization activity; F:protein homodimerization activity; F:structural molecule activity    
contig00243 isoform cra_a 622 20 5.24E-68 74.00% 0      
contig00244 ---NA--- 477 0     0      
contig00245 ring finger 1 1869 20 2.36E-75 48.30% 1 F:binding    
contig00246 cytokine induced apoptosis inhibitor 1 1467 20 2.16E-110 74.80% 3 C:cytoplasm; P:hemopoiesis; P:anti-apoptosis    
contig00247 translocase of outer mitochondrial membrane 22 homolog 680 20 8.21E-31 84.55% 7 ; P:intracellular protein transmembrane transport; F:receptor activity; C:mitochondrial inner membrane; F:protein binding; C:mitochondrial outer membrane translocase complex; C:integral to membrane    
contig00248 poly a binding cytoplasmic 1 b 703 20 9.29E-65 67.80% 6 F:protein self-association; F:poly(A) RNA binding; P:negative regulation of nuclear-transcribed mRNA poly(A) tail shortening; P:mRNA stabilization; C:polysome; F:eukaryotic initiation factor 4G binding    
contig00249 3-hydroxy-3-methylglutaryl lyase 1171 20 1.49E-68 93.05% 7 C:extracellular space; F:carboxylic acid binding; P:acyl-CoA metabolic process; C:mitochondrial inner membrane; P:ketone body biosynthetic process; C:mitochondrial matrix; F:hydroxymethylglutaryl-CoA lyase activity EC:4.1.3.4  
contig00250 myg1 protein 1068 20 8.29E-132 80.40% 0      
contig00251 ---NA--- 271 0     0      
contig00252 ---NA--- 904 0     0      
contig00253 ---NA--- 524 0     0      
contig00254 haus augmin-like subunit 6 2261 20 2.46E-138 52.40% 2 P:P; C:C    
contig00255 polymerase ii (dna directed) polypeptide 507 20 6.97E-17 99.20% 7 P:transcription from RNA polymerase III promoter; F:DNA-directed RNA polymerase activity; C:DNA-directed RNA polymerase II, core complex; F:DNA binding; F:zinc ion binding; P:regulation of transcription from RNA polymerase I promoter; P:transcription from RNA polymerase II promoter EC:2.7.7.6  
contig00256 polo-like kinase 1 2358 20 0 87.00% 9 P:protein amino acid phosphorylation; P:cell proliferation; F:protein binding; P:mitosis; C:spindle; C:centrosome; F:ATP binding; C:nucleus; F:protein serine/threonine kinase activity EC:2.7.11.0  
contig00257 dna ligase i 700 20 2.74E-101 84.60% 10 P:V(D)J recombination; P:DNA replication; F:DNA binding; P:anatomical structure morphogenesis; P:cell cycle; F:ATP binding; C:nucleus; F:DNA ligase (ATP) activity; P:cell division; P:DNA repair EC:6.5.1.1  
contig00258 ---NA--- 693 0     0      
contig00259 det1 and ddb1 associated 1 343 20 2.51E-53 95.40% 1 P:ubiquitin cycle    
contig00260 ---NA--- 244 0     0      
contig00261 c6orf162 homolog 356 20 4.56E-15 90.55% 1 C:integral to membrane    
contig00262 ---NA--- 167 0     0      
contig00263 ---NA--- 276 0     0      
contig00264 ---NA--- 383 0     0      
contig00265 ---NA--- 121 0     0      
contig00266 ---NA--- 438 0     0      
contig00267 protein phosphatase catalytic gamma isoform 1092 20 3.14E-150 98.35% 13 P:protein amino acid dephosphorylation; P:cell cycle; F:manganese ion binding; C:synapse; F:identical protein binding; P:cellular iron ion homeostasis; P:cell division; C:mitochondrial outer membrane; F:protein serine/threonine phosphatase activity; P:iron ion transport; P:glycogen metabolic process; F:iron ion binding; C:nucleus    
contig00268 egg-specific protein 633 20 2.33E-42 65.50% 0      
contig00269 lamin a c 1325 20 1.47E-147 68.50% 7 P:spermatogenesis; P:nuclear envelope organization; C:intermediate filament; C:nuclear matrix; C:insoluble fraction; C:nuclear inner membrane; F:structural molecule activity    
contig00270 protein phosphatase catalytic beta isoform 493 20 4.02E-96 100.00% 11 P:protein amino acid dephosphorylation; P:cytokinesis; P:cell cycle; F:manganese ion binding; P:cellular iron ion homeostasis; F:protein serine/threonine phosphatase activity; P:iron ion transport; F:protein binding; P:glycogen metabolic process; C:cytoplasm; F:iron ion binding    
contig00271 ring finger and chy zinc finger domain containing 1 706 20 2.32E-47 82.50% 5 C:cytoplasm; P:zinc ion transport; C:nucleus; F:zinc ion binding; F:protein binding    
contig00272 ---NA--- 272 0     0      
contig00273 translocase of outer mitochondrial membrane 5 homolog 557 14 4.40E-11 96.14% 0      
contig00274 ankyrin repeat and kh domain containing 1 369 20 1.75E-22 77.95% 2 F:RNA binding; C:cytoplasm    
contig00275 ---NA--- 660 0     0      
contig00276 retinoblastoma binding protein 4 982 20 1.73E-24 98.00% 8 P:cell cycle; P:regulation of transcription, DNA-dependent; P:DNA replication; P:negative regulation of cell proliferation; C:NuRD complex; F:protein binding; F:DNA-dependent ATPase activity; P:chromatin remodeling    
contig00277 ---NA--- 594 0     0      
contig00278 ---NA--- 221 0     0      
contig00279 ---NA--- 399 0     0      
contig00280 brix domain containing 1 1297 20 7.35E-136 88.70% 2 C:nucleus; F:protein binding    
contig00281 histone cluster h2ab 468 20 6.55E-46 100.00% 8 P:defense response to bacterium; C:nucleosome; P:xenobiotic metabolic process; F:DNA binding; P:nucleosome assembly; P:meiosis; P:defense response to fungus; C:nucleus    
contig00282 proline rich 5 like 322 20 1.02E-38 79.70% 0      
contig00283 ---NA--- 373 0     0      
contig00284 m-phase phosphoprotein 1 2708 20 0 58.85% 6 P:cellular process; C:microtubule cytoskeleton; C:nuclear lumen; F:nucleotide binding; C:cytoplasm; C:cytoskeletal part    
contig00285 zgc:171967 protein 636 20 3.38E-73 78.80% 1 F:hydrolase activity, hydrolyzing O-glycosyl compounds EC:3.2.1.0  
contig00286 poly binding nuclear 1 1270 20 2.20E-60 74.20% 6 C:cytoplasm; P:mRNA polyadenylation; P:muscle contraction; F:protein binding; F:poly(A) RNA binding; C:nucleus    
contig00287 mki67 (fha domain) interacting nucleolar phosphoprotein 462 20 1.37E-51 80.10% 4 F:RNA binding; F:nucleotide binding; C:intracellular non-membrane-bounded organelle; C:nuclear lumen    
contig00288 guanine nucleotide binding 2 424 20 1.60E-68 83.15% 5 F:GTPase activity; C:nucleus; F:protein binding; P:ribosome biogenesis; F:GTP binding EC:3.6.5.1; EC:3.6.5.2; EC:3.6.5.3; EC:3.6.5.4  
contig00289 ---NA--- 418 0     0      
contig00290 ---NA--- 386 0     0      
contig00291 chromatin licensing and dna replication factor 1 1120 20 2.23E-82 75.50% 6 P:regulation of S phase of mitotic cell cycle; P:DNA replication checkpoint; C:replication fork; F:DNA binding; F:protein binding; C:nucleus    
contig00292 ---NA--- 154 0     0      
contig00293 ct094_danre ame: full=upf0492 protein c20orf94 homolog 400 1 2.79E-04 63.00% 2 F:F; C:C    
contig00294 heat shock protein 4 1558 20 3.93E-150 91.65% 4 C:cytoplasm; F:ATP binding; P:response to unfolded protein; P:response to heat    
contig00295 akirin 1 680 20 5.99E-82 76.50% 2 F:F; C:C    
contig00296 pseudouridylate synthase 10 833 20 3.72E-96 83.85% 2 P:tRNA processing; F:isomerase activity    
contig00297 ---NA--- 271 0     0      
contig00298 vacuolar protein sorting 45 435 20 1.00E-22 97.60% 5 C:Golgi apparatus; F:protein binding; P:vesicle docking during exocytosis; C:endosome membrane; P:protein transport    
contig00299 diablo mitochondrial precursor 251 3 2.30E-11 79.67% 0      
contig00300 nanos homolog 3 1519 20 6.24E-44 69.40% 5 F:zinc ion binding; F:nucleic acid binding; P:spermatogenesis; P:oocyte growth; P:asymmetric protein localization involved in cell fate determination    
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