Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 2501 - 2600:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig02501 ---NA--- 259 0     0      
contig02502 ---NA--- 114 0     0      
contig02503 sh3 domain binding glutamic acid-rich protein like 3 388 20 6.92E-40 80.85% 2 C:nucleus; C:cytoplasm    
contig02504 aurora kinase b 463 20 2.60E-42 66.15% 5 F:metal ion binding; F:protein kinase activity; C:intracellular organelle; P:cellular process; F:nucleotide binding    
contig02505 thymidine kinase mitochondrial 557 20 8.81E-69 86.10% 5 P:DNA replication; F:thymidine kinase activity; F:phosphotransferase activity, alcohol group as acceptor; F:ATP binding; C:mitochondrion EC:2.7.1.21; EC:2.7.1.0  
contig02506 ---NA--- 265 0     0      
contig02507 ---NA--- 264 0     0      
contig02508 kinesin family member 11 525 7 7.23E-23 52.29% 11 P:microtubule-based movement; C:microtubule associated complex; P:mitosis; C:microtubule; C:cytoplasm; F:nucleotide binding; P:cell division; F:ATP binding; F:microtubule motor activity; F:motor activity; P:cell cycle    
contig02509 neuroepithelial cell transforming gene 1 312 20 1.26E-25 92.50% 4 P:regulation of Rho protein signal transduction; C:cytoplasm; C:nucleus; F:Rho guanyl-nucleotide exchange factor activity    
contig02510 ---NA--- 260 0     0      
contig02511 rna binding protein with multiple splicing 2 2061 20 9.72E-86 91.60% 2 F:nucleotide binding; F:RNA binding    
contig02512 chromosome 6 open reading frame 66 752 20 2.37E-48 61.90% 1 P:positive regulation of cell proliferation    
contig02513 ---NA--- 262 0     0      
contig02514 ---NA--- 302 0     0      
contig02515 ---NA--- 261 0     0      
contig02516 5 -3 exoribonuclease 2 1021 20 1.31E-163 82.65% 14 P:DNA recombination; P:DNA repair; P:cell growth; F:zinc ion binding; F:nucleic acid binding; F:5'-3' exoribonuclease activity; C:nucleolus; P:regulation of transcription, DNA-dependent; P:spermatogenesis; F:protein binding; P:microtubule-based process; P:transcription termination; P:DNA catabolic process, exonucleolytic; P:mRNA processing    
contig02517 actin binding 1c 1447 20 1.33E-96 84.80% 5 P:phagocytosis; F:actin binding; P:actin cortical patch assembly; P:signal transduction; C:actin cytoskeleton    
contig02518 ---NA--- 410 0     0      
contig02519 novel protein (zgc:153058) 550 20 1.75E-36 67.55% 2 F:F; C:C    
contig02520 ---NA--- 260 0     0      
contig02521 yip1 interacting factor homolog a ( cerevisiae) 1194 20 2.87E-107 86.75% 6 C:Golgi membrane; C:endoplasmic reticulum membrane; C:ER-Golgi intermediate compartment; C:membrane attack complex; P:vesicle-mediated transport; P:protein transport    
contig02522 tia1 cytotoxic granule-associated rna binding 1 268 20 7.22E-45 96.00% 6 C:cytoplasm; P:negative regulation of cytokine biosynthetic process; P:negative regulation of translation; C:nucleus; F:nucleotide binding; F:AU-rich element binding    
contig02523 ---NA--- 238 0     0      
contig02524 atp-binding sub-family a member 5 182 20 2.37E-24 78.10% 8 C:endosome; P:sterol transport; C:lysosome; C:organelle membrane; F:ATP binding; F:nucleoside-triphosphatase activity; C:membrane part; C:intracellular organelle part EC:3.6.1.15  
contig02525 paf1 rna polymerase ii complex component 246 20 3.94E-19 93.75% 7 P:neural crest cell development; F:protein binding; P:pigmentation; P:heart development; P:tail morphogenesis; C:nucleus; P:regulation of transcription, DNA-dependent    
contig02526 ---NA--- 266 0     0      
contig02527 signal recognition particle 54 275 20 4.38E-18 96.25% 7 F:GTP binding; C:nuclear speck; P:SRP-dependent cotranslational protein targeting to membrane; C:signal recognition particle, endoplasmic reticulum targeting; F:nucleoside-triphosphatase activity; C:membrane; F:7S RNA binding EC:3.6.5.4; EC:3.6.1.15  
contig02528 ubiquitin-activating enzyme e1 386 20 3.70E-25 86.50% 6 F:ligase activity; F:ubiquitin activating enzyme activity; F:protein binding; P:ubiquitin-dependent protein catabolic process; P:ubiquitin cycle; F:ATP binding    
contig02529 methylenetetrahydrofolate dehydrogenase 2 278 20 8.77E-27 81.15% 10 C:extracellular space; P:one-carbon metabolic process; F:methylenetetrahydrofolate dehydrogenase (NAD+) activity; F:methylenetetrahydrofolate dehydrogenase (NADP+) activity; F:methenyltetrahydrofolate cyclohydrolase activity; F:magnesium ion binding; P:folic acid and derivative biosynthetic process; F:phosphate binding; P:tetrahydrofolate metabolic process; C:mitochondrion EC:1.5.1.15; EC:1.5.1.5; EC:3.5.4.9  
contig02530 ---NA--- 597 0     0      
contig02531 mitochondrial ribosomal protein s5 757 20 1.40E-96 82.55% 5 C:ribosome; F:structural constituent of ribosome; F:RNA binding; P:translation; C:mitochondrion EC:3.6.5.3  
contig02532 aquarius homolog 482 20 2.05E-76 89.50% 4 F:RNA binding; P:mRNA processing; C:spliceosomal complex; P:RNA splicing    
contig02533 pif1 5 -to-3 dna helicase homolog 546 20 1.11E-77 70.10% 5 F:nucleoside-triphosphatase activity; F:ATP binding; F:helicase activity; C:nucleus; F:DNA binding EC:3.6.1.15  
contig02534 ---NA--- 685 0     0      
contig02535 ---NA--- 716 0     0      
contig02536 stress-induced-phosphoprotein 1 (hsp70 hsp90-organizing protein) 404 20 5.17E-51 87.65% 4 P:response to stress; C:Golgi apparatus; F:binding; C:nucleus    
contig02537 ---NA--- 183 0     0      
contig02538 glutathione s-transferase 908 20 4.59E-94 87.35% 2 C:cytoplasm; F:glutathione transferase activity EC:2.5.1.18  
contig02539 glutathione s-transferase 556 20 1.82E-57 85.00% 2 C:cytoplasm; F:glutathione transferase activity EC:2.5.1.18  
contig02540 wd repeats and sof1 domain containing 404 20 2.96E-22 85.85% 3 P:rRNA processing; C:ribonucleoprotein complex; C:nucleus    
contig02541 ---NA--- 457 0     0      
contig02542 squamous cell carcinoma antigen recognized by t cells 292 20 4.44E-18 88.65% 7 C:cytosol; P:cell cycle arrest; P:positive regulation of cytotoxic T cell differentiation; P:RNA splicing; P:induction of apoptosis by intracellular signals; C:spliceosomal complex; P:mRNA processing    
contig02543 ---NA--- 364 0     0      
contig02544 ---NA--- 319 0     0      
contig02545 ---NA--- 178 0     0      
contig02546 tetratricopeptide repeat domain 35 637 20 3.62E-67 93.45% 3 C:nucleus; F:binding; C:endoplasmic reticulum    
contig02547 ---NA--- 262 0     0      
contig02548 mitochondrial fission 1 protein 262 20 1.13E-13 88.40% 6 C:integral to peroxisomal membrane; P:apoptosis; F:protein binding; P:peroxisome fission; P:mitochondrial fission; C:integral to mitochondrial outer membrane    
contig02549 ---NA--- 396 0     0      
contig02550 aspartyl-trna synthetase 365 20 7.34E-58 95.10% 9 C:cytoplasm; P:protein complex assembly; C:soluble fraction; F:nucleic acid binding; P:aspartyl-tRNA aminoacylation; F:protein binding; F:aminoacylase activity; F:ATP binding; F:aspartate-tRNA ligase activity EC:3.5.1.14; EC:6.1.1.12  
contig02551 aldose reductase 659 20 7.74E-44 76.10% 2 F:aldehyde reductase activity; C:cytoplasm EC:1.1.1.21  
contig02552 dead (asp-glu-ala-asp) box polypeptide 27 613 20 2.11E-82 96.25% 3 F:nucleic acid binding; F:ATP binding; F:ATP-dependent helicase activity    
contig02553 fintrim family protein 637 20 9.61E-36 60.35% 5 F:metal ion binding; P:zinc ion transport; F:zinc ion binding; F:protein binding; C:intracellular    
contig02554 importin isoform cra_f 356 20 2.11E-28 75.75% 1 C:intracellular part    
contig02555 novel protein 568 6 1.51E-09 62.00% 2 P:P; C:C    
contig02556 cpeb-associated factor maskin 252 3 3.01E-14 79.67% 0      
contig02557 ---NA--- 400 0     0      
contig02558 loc100037002 protein 307 2 8.23E-17 73.50% 0      
contig02559 ring finger protein 182 287 1 4.96E-09 61.00% 0      
contig02560 -like 2 245 20 1.11E-37 97.35% 17 P:chromatin modification; C:cytosol; C:nuclear matrix; F:damaged DNA binding; P:DNA recombination; P:DNA repair; F:ATP-dependent DNA helicase activity; P:protein folding; P:regulation of transcription, DNA-dependent; P:regulation of cell growth; F:identical protein binding; C:NuA4 histone acetyltransferase complex; F:ATP binding; P:transcription antitermination; F:unfolded protein binding; P:negative regulation of transcription; C:membrane    
contig02561 cdc42 small effector 2 407 20 2.57E-26 83.10% 5 F:kinase activity; P:signal transduction; F:structural molecule activity; F:protein binding; C:plasma membrane    
contig02562 apolipoprotein o-like 383 20 6.97E-40 69.30% 1 C:mitochondrial inner membrane    
contig02563 ---NA--- 570 0     0      
contig02564 ---NA--- 163 0     0      
contig02565 akt interacting protein 344 20 2.21E-33 93.95% 8 C:cytoplasm; P:apoptosis; C:plasma membrane; F:protein binding; P:positive regulation of protein amino acid phosphorylation; P:ubiquitin cycle; P:positive regulation of protein binding; F:small conjugating protein ligase activity    
contig02566 upregulated during skeletal muscle growth 5 variant 1 384 14 1.11E-21 74.43% 1 C:mitochondrial inner membrane    
contig02567 methionine aminopeptidase 1d 321 20 6.83E-27 88.40% 9 P:cobalt ion transport; F:cobalt ion binding; F:cobalt ion transmembrane transporter activity; P:N-terminal protein amino acid modification; F:methionyl aminopeptidase activity; P:peptidyl-methionine modification; P:proteolysis; F:endopeptidase inhibitor activity; C:mitochondrion EC:3.4.11.18  
contig02568 ---NA--- 566 0     0      
contig02569 fucose-1-phosphate guanylyltransferase 459 4 2.73E-12 78.25% 2 F:F; C:C    
contig02570 ---NA--- 266 0     0      
contig02571 ---NA--- 259 0     0      
contig02572 nucleolar protein family 6 (rna-associated) 982 20 2.76E-131 72.90% 4 F:RNA binding; C:small nucleolar ribonucleoprotein complex; F:protein binding; C:condensed nuclear chromosome    
contig02573 proteasome subunit alpha type-7 1263 20 4.30E-125 97.85% 5 C:proteasome core complex; F:threonine-type endopeptidase activity; P:ubiquitin-dependent protein catabolic process; F:endopeptidase inhibitor activity; C:nucleus EC:3.4.25.0  
contig02574 eap30 subunit of ell complex 610 20 4.32E-35 87.70% 6 C:cytoplasm; P:regulation of transcription from RNA polymerase II promoter; F:RNA polymerase II transcription factor activity; C:transcription factor complex; F:transcription factor binding; P:protein transport    
contig02575 abc1 activity of bc1 complex like ( pombe) 320 20 1.87E-24 73.15% 2 F:kinase activity; F:nucleotide binding    
contig02576 ---NA--- 955 0     0      
contig02577 ---NA--- 281 0     0      
contig02578 pseudouridine synthase homolog 2 ( coli) 608 20 1.19E-77 79.30% 4 F:RNA binding; F:pseudouridylate synthase activity; P:tRNA pseudouridine synthesis; F:isomerase activity EC:4.2.1.70  
contig02579 ---NA--- 363 0     0      
contig02580 nitric oxide synthase interacting protein 271 20 2.57E-26 97.05% 7 C:cytoplasm; P:negative regulation of nitric-oxide synthase activity; F:protein binding; P:protein ubiquitination; F:ubiquitin-protein ligase activity; C:nucleus; C:ubiquitin ligase complex EC:6.3.2.19  
contig02581 cofilin 2 1050 20 1.82E-83 94.00% 11 C:nuclear matrix; P:positive regulation of actin filament depolymerization; P:cytokinesis; P:negative regulation of cell size; P:actin filament organization; P:cell projection organization; P:neural fold formation; C:cortical actin cytoskeleton; F:actin binding; P:establishment of cell polarity; P:neural crest cell migration    
contig02582 ---NA--- 724 0     0      
contig02583 tm2 domain containing 1 1019 20 3.19E-77 84.00% 6 F:G-protein coupled receptor activity; C:integral to plasma membrane; F:beta-amyloid binding; P:induction of apoptosis by extracellular signals; C:signal recognition particle, endoplasmic reticulum targeting; P:negative regulation of signal transduction EC:3.6.5.4  
contig02584 peptidylprolyl isomerase -like 4 432 20 9.59E-74 94.30% 5 P:protein folding; F:RNA binding; F:peptidyl-prolyl cis-trans isomerase activity; C:nucleus; F:nucleotide binding EC:5.2.1.8  
contig02585 nuclear transport factor 2 742 20 6.98E-37 72.15% 5 C:nuclear pore; P:protein import into nucleus; F:protein binding; F:protein transporter activity; C:cytosol    
contig02586 solute carrier family member 2 505 20 1.32E-28 65.00% 2 F:protein binding; C:membrane    
contig02587 orai calcium release-activated calcium modulator 2 668 20 9.25E-48 77.00% 1 C:integral to membrane    
contig02588 ---NA--- 230 0     0      
contig02589 aurora kinase a interacting protein 1 986 20 4.07E-70 68.55% 3 P:positive regulation of proteolysis; F:protein binding; C:nucleus    
contig02590 ---NA--- 305 0     0      
contig02591 zinc c4h2 domain containing 394 20 2.89E-33 94.65% 0      
contig02592 hcv f-transactivated protein 1 isoform 2 852 5 4.58E-04 62.80% 0      
contig02593 prefoldin subunit 6 680 20 1.18E-53 86.55% 4 P:protein folding; C:prefoldin complex; F:unfolded protein binding; C:nucleus    
contig02594 methionine adenosyltransferase alpha 345 20 7.77E-55 92.70% 8 F:potassium channel inhibitor activity; P:one-carbon metabolic process; F:potassium channel activity; F:methionine adenosyltransferase activity; F:potassium ion binding; F:ATP binding; F:magnesium ion binding; P:potassium ion transport EC:2.5.1.6  
contig02595 ---NA--- 403 0     0      
contig02596 ---NA--- 448 0     0      
contig02597 ---NA--- 270 0     0      
contig02598 PREDICTED: hypothetical protein [Danio rerio] 1666 1 1.95E-09 64.00% 0      
contig02599 ---NA--- 278 0     0      
contig02600 ---NA--- 706 0     0      
100 Rows returned.
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