Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 2401 - 2500:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig02401 proteasome ( macropain) activator subunit 3 (pa28 gamma ki) 1175 20 2.60E-129 91.35% 5 C:cytosol; F:identical protein binding; C:proteasome activator complex; F:proteasome activator activity; F:peptidase activity    
contig02402 ---NA--- 197 0     0      
contig02403 ---NA--- 285 0     0      
contig02404 fk506-binding protein 2 precursor 755 20 2.17E-41 97.95% 4 C:endoplasmic reticulum membrane; C:extracellular space; P:protein folding; F:peptidyl-prolyl cis-trans isomerase activity EC:5.2.1.8  
contig02405 f-box protein 43 987 20 3.04E-69 63.60% 7 F:metal ion binding; F:F; P:P; F:zinc ion binding; P:ubiquitin cycle; P:meiosis; C:C    
contig02406 cdna sequence bc031781 793 20 1.77E-60 74.75% 2 F:F; C:C    
contig02407 ---NA--- 161 0     0      
contig02408 dead (asp-glu-ala-asp) box polypeptide 20 430 20 5.74E-18 62.55% 20 F:protein domain specific binding; F:helicase activity; P:positive regulation of apoptosis; F:hydrolase activity; F:DNA binding; C:nucleus; F:nucleic acid binding; P:induction of apoptosis; F:ATP binding; P:negative regulation of transcription from RNA polymerase II promoter; F:transcription repressor activity; C:transcriptional repressor complex; P:negative regulation of transcription; F:nucleotide binding; P:mRNA processing; C:cytoplasm; P:RNA splicing; F:ATP-dependent helicase activity; F:protein binding; C:spliceosomal complex    
contig02409 ts translation elongation mitochondrial 360 20 1.11E-37 70.75% 5 F:translation elongation factor activity; F:transcription elongation regulator activity; F:protein binding; C:mitochondrion; P:translational elongation    
contig02410 ---NA--- 271 0     0      
contig02411 hypothetical loc548371 840 20 6.41E-19 52.55% 2 F:F; C:C    
contig02412 ---NA--- 310 0     0      
contig02413 sialic acid acetylesterase 237 20 1.28E-25 81.85% 2 C:lysosome; F:sialate O-acetylesterase activity EC:3.1.1.53  
contig02414 ---NA--- 194 0     0      
contig02415 ---NA--- 266 0     0      
contig02416 ---NA--- 266 0     0      
contig02417 ---NA--- 593 0     0      
contig02418 sox3 protein 1075 20 5.77E-149 92.20% 11 F:beta-catenin binding; P:positive regulation of transcription factor activity; F:transcription repressor activity; P:negative regulation of transcription from RNA polymerase II promoter; F:sequence-specific DNA binding; C:chromatin; F:transcription factor activity; P:transcription antitermination; C:cytoplasm; C:nucleus; P:formation of primary germ layer    
contig02419 activated rna polymerase ii transcriptional coactivator p15 582 20 5.48E-34 94.15% 4 F:transcription coactivator activity; P:regulation of transcription from RNA polymerase II promoter; C:transcription factor complex; F:single-stranded DNA binding    
contig02420 gamma-aminobutyric acid rho 2 945 20 8.20E-69 79.55% 10 C:integral to plasma membrane; F:GABA-A receptor activity; C:postsynaptic membrane; P:synaptic transmission; C:cell junction; F:extracellular ligand-gated ion channel activity; C:membrane attack complex; P:ion transport; P:signal transduction; F:neurotransmitter receptor activity    
contig02421 ---NA--- 607 0     0      
contig02422 ---NA--- 467 0     0      
contig02423 ---NA--- 399 0     0      
contig02424 ---NA--- 361 0     0      
contig02425 sorting and assembly machinery component 50 homolog 694 20 1.08E-118 91.75% 3 C:mitochondrial inner membrane; C:integral to membrane; C:mitochondrial outer membrane    
contig02426 ---NA--- 311 0     0      
contig02427 tpr domain protein 1051 20 1.08E-51 53.75% 0      
contig02428 cop9 constitutive photomorphogenic homolog subunit 6 582 20 1.18E-34 95.60% 3 C:cytoplasm; F:protein binding; C:signalosome    
contig02429 ---NA--- 253 0     0      
contig02430 mediator complex subunit 27 323 20 1.02E-14 93.55% 6 P:retinal cone cell development; P:regulation of transcription from RNA polymerase II promoter; P:transcription initiation from RNA polymerase II promoter; C:transcription factor complex; P:transcription antitermination; F:transcription coactivator activity    
contig02431 ---NA--- 442 0     0      
contig02432 ---NA--- 430 0     0      
contig02433 dead (asp-glu-ala-asp) box polypeptide y-linked 453 20 1.59E-60 93.90% 6 C:cytoplasm; F:ATP-dependent RNA helicase activity; F:DNA binding; F:RNA binding; F:ATP binding; C:nucleus    
contig02434 ---NA--- 266 0     0      
contig02435 ---NA--- 296 0     0      
contig02436 ---NA--- 125 0     0      
contig02437 signal recognition particle 54 772 20 2.53E-141 98.65% 7 F:GTP binding; C:nuclear speck; P:SRP-dependent cotranslational protein targeting to membrane; C:signal recognition particle, endoplasmic reticulum targeting; F:nucleoside-triphosphatase activity; C:membrane; F:7S RNA binding EC:3.6.5.4; EC:3.6.1.15  
contig02438 isocitrate dehydrogenase 2 (nadp+) mitochondrial 966 20 1.28E-169 92.35% 6 F:manganese ion binding; C:mitochondrial inner membrane; F:isocitrate dehydrogenase (NADP+) activity; F:magnesium ion binding; P:tricarboxylic acid cycle; P:glyoxylate cycle EC:1.1.1.42  
contig02439 otu ubiquitin aldehyde binding 1 1179 20 6.89E-130 92.25% 3 P:immune response; P:ubiquitin cycle; F:cysteine-type peptidase activity    
contig02440 septin 9 489 20 3.61E-20 76.15% 5 P:protein heterooligomerization; F:protein binding; F:nucleotide binding; C:perinuclear region of cytoplasm; C:microtubule    
contig02441 unnamed protein product [Tetraodon nigroviridis] 243 1 7.23E-05 81.00% 0      
contig02442 ---NA--- 252 0     0      
contig02443 ---NA--- 380 0     0      
contig02444 beta-galactoside alpha -sialyltransferase st6gal i 252 4 2.16E-04 95.50% 9 F:transferase activity; C:integral to membrane; C:membrane; F:beta-galactoside alpha-2,6-sialyltransferase activity; F:transferase activity, transferring glycosyl groups; C:Golgi apparatus; F:sialyltransferase activity; P:protein amino acid glycosylation; C:integral to Golgi membrane    
contig02445 ---NA--- 300 0     0      
contig02446 mediator complex subunit 1 1743 20 1.81E-123 54.10% 6 F:transcription regulator activity; P:regulation of transcription, DNA-dependent; F:transcription factor binding; F:nuclear hormone receptor binding; C:nucleus; P:transcription from RNA polymerase II promoter    
contig02447 grtp1 protein 253 20 6.66E-38 95.10% 5 C:intracellular; F:Rab GTPase activator activity; C:extracellular region; P:regulation of Rab GTPase activity; F:hormone activity    
contig02448 ---NA--- 167 0     0      
contig02449 keratinocyte associated protein 2 950 20 1.56E-51 86.25% 5 C:extracellular space; C:oligosaccharyltransferase complex; C:integral to membrane; F:dolichyl-diphosphooligosaccharide-protein glycotransferase activity; P:protein amino acid N-linked glycosylation via asparagine EC:2.4.1.119  
contig02450 yme1-like 1 931 20 1.07E-12 90.00% 6 F:metalloendopeptidase activity; P:protein catabolic process; F:ATP binding; F:nucleoside-triphosphatase activity; P:proteolysis; C:membrane EC:3.4.24.0; EC:3.6.1.15  
contig02451 ---NA--- 816 0     0      
contig02452 polycomb group ring finger 1 883 20 7.26E-93 87.10% 6 F:protein binding; P:zinc ion transport; P:transcription antitermination; C:nucleus; F:zinc ion binding; P:regulation of transcription, DNA-dependent    
contig02453 centrin 3 897 20 3.50E-74 94.10% 8 F:calcium ion binding; F:calcium channel inhibitor activity; F:calcium channel activity; P:cell division; P:calcium ion transport; P:mitosis; C:centriole; P:centrosome cycle    
contig02454 las1-like ( cerevisiae) 1672 20 4.23E-113 51.55% 2 F:protein binding; C:nucleus    
contig02455 ---NA--- 290 0     0      
contig02456 brf1 subunit of rna polymerase iii transcription initiation factor iiib 411 20 2.02E-23 63.95% 9 F:translation initiation factor activity; P:translational initiation; F:zinc ion binding; P:transcription initiation; P:regulation of transcription, DNA-dependent; C:transcription factor complex; F:transcription activator activity; F:protein binding; P:positive regulation of transcription    
contig02457 ---NA--- 487 0     0      
contig02458 ---NA--- 704 0     0      
contig02459 oxysterol-binding protein partial 902 2 1.90E-11 70.50% 0      
contig02460 ---NA--- 713 0     0      
contig02461 mediator of rna polymerase ii transcription subunit 10 1196 20 4.48E-68 96.25% 2 C:nucleus; P:regulation of transcription, DNA-dependent    
contig02462 ---NA--- 255 0     0      
contig02463 ---NA--- 756 0     0      
contig02464 ---NA--- 894 0     0      
contig02465 ---NA--- 321 0     0      
contig02466 ---NA--- 259 0     0      
contig02467 protein 270 20 4.68E-28 96.00% 10 C:endomembrane system; F:GTP binding; C:Golgi apparatus; C:sarcomere; F:protein binding; F:phospholipase activator activity; P:vesicle-mediated transport; C:cytosol; P:small GTPase mediated signal transduction; P:protein transport    
contig02468 endothelial lipase 764 20 4.05E-121 83.95% 9 C:extracellular space; F:heparin binding; P:cell proliferation; P:response to nutrient; P:lipid catabolic process; F:protein binding; F:triglyceride lipase activity; F:lipoprotein lipase activity; F:phospholipase A1 activity EC:3.1.1.3; EC:3.1.1.34; EC:3.1.1.32  
contig02469 ---NA--- 305 0     0      
contig02470 ---NA--- 275 0     0      
contig02471 ankyrin repeat domain 46 305 19 6.32E-17 94.84% 2 C:integral to membrane; F:transcription factor activity    
contig02472 mitochondrial ribosomal protein l2 398 20 8.34E-41 75.05% 4 C:extracellular space; C:ribosome; P:translation; C:mitochondrion EC:3.6.5.3  
contig02473 ---NA--- 326 0     0      
contig02474 riken cdna 6330578e17 variant 1 571 20 8.66E-37 84.00% 2 P:P; C:C    
contig02475 polymerase ii (dna directed) polypeptide g 376 20 9.16E-48 98.30% 8 F:DNA-directed RNA polymerase activity; F:RNA binding; P:transcription-coupled nucleotide-excision repair; P:regulation of transcription, DNA-dependent; C:DNA-directed RNA polymerase II, core complex; F:protein binding; P:transcription antitermination; P:transcription from RNA polymerase II promoter EC:2.7.7.6  
contig02476 ---NA--- 642 0     0      
contig02477 metastasis associated 1 member 3 699 20 1.97E-83 95.25% 6 C:cytoplasm; F:sequence-specific DNA binding; F:transcription factor activity; C:nucleus; F:zinc ion binding; P:regulation of transcription, DNA-dependent    
contig02478 ---NA--- 365 0     0      
contig02479 dead (asp-glu-ala-asp) box polypeptide 51 553 20 1.90E-75 77.40% 5 F:ATP-dependent helicase activity; P:ribosome biogenesis; F:RNA binding; F:ATP binding; C:nucleus    
contig02480 ---NA--- 227 0     0      
contig02481 eukaryotic translation initiation factor 4 2 1434 20 2.28E-40 95.45% 6 C:eukaryotic translation initiation factor 4F complex; P:mesoderm development; F:protein binding; P:regulation of translational initiation; F:translation initiation factor activity; P:RNA metabolic process    
contig02482 nicotinamide nucleotide transhydrogenase 616 20 2.91E-47 97.35% 7 F:NAD(P)+ transhydrogenase (AB-specific) activity; C:mitochondrial inner membrane; F:NADP or NADPH binding; P:electron transport; P:proton transport; C:integral to membrane; P:metabolic process EC:1.6.1.2  
contig02483 ---NA--- 385 0     0      
contig02484 capping protein (actin filament) muscle z- alpha 2 292 20 3.49E-47 85.70% 5 P:barbed-end actin filament capping; F:actin binding; C:F-actin capping protein complex; C:cytoplasm; C:nucleus    
contig02485 ---NA--- 1071 0     0      
contig02486 ras homolog gene member c 1007 20 4.18E-106 96.70% 39 P:positive regulation of cell growth; F:signal transducer activity; P:Rho protein signal transduction; P:negative regulation of neuron differentiation; F:protein binding; P:skeletal muscle tissue development; P:cell-matrix adhesion; P:response to ethanol; P:response to mechanical stimulus; C:membrane fraction; P:positive regulation of neuron apoptosis; C:membrane attack complex; F:GTP binding; P:positive regulation of vasoconstriction; P:negative regulation of calcium ion transport via voltage-gated calcium channel activity; P:negative regulation of I-kappaB kinase/NF-kappaB cascade; P:positive regulation of translation; P:integrin-mediated signaling pathway; C:cytosol; P:negative regulation of neuron apoptosis; P:stress-activated protein kinase signaling pathway; P:positive regulation of smooth muscle contraction; P:positive regulation of I-kappaB kinase/NF-kappaB cascade; P:stress fiber assembly; P:response to hypoxia; C:cytoskeleton; P:response to drug; P:response to amino acid stimulus; P:positive regulation of cell adhesion; P:endosome to lysosome transport; P:positive regulation of actin filament polymerization; F:GTPase activity; P:positive regulation of caspase activity; C:plasma membrane; C:soluble fraction; P:positive regulation of cell migration; C:nucleus; C:endosome membrane; P:regulation of dendrite development EC:3.6.5.1; EC:3.6.5.2; EC:3.6.5.3; EC:3.6.5.4  
contig02487 ---NA--- 324 0     0      
contig02488 ---NA--- 351 0     0      
contig02489 unnamed protein product [Tetraodon nigroviridis] 251 1 9.04E-16 85.00% 0      
contig02490 unnamed protein product [Tetraodon nigroviridis] 548 1 3.27E-11 89.00% 0      
contig02491 ---NA--- 250 0     0      
contig02492 ---NA--- 239 0     0      
contig02493 c4orf27 homolog 349 20 1.47E-37 75.05% 1 C:nucleus    
contig02494 btb domain containing 10 808 20 7.38E-89 92.95% 5 C:voltage-gated potassium channel complex; F:voltage-gated potassium channel activity; F:protein binding; P:potassium ion transport; C:nucleus    
contig02495 cell division cycle paf1 rna polymerase ii complex homolog ( cerevisiae) 656 20 3.92E-96 89.00% 4 P:transcription; P:negative regulation of cell cycle; C:nucleus; F:protein binding    
contig02496 zinc hit domain containing 2 619 2 3.08E-12 62.00% 2 F:F; P:P    
contig02497 ---NA--- 267 0     0      
contig02498 tbcc domain containing 1 257 20 1.14E-21 64.50% 1 F:binding    
contig02499 ---NA--- 459 0     0      
contig02500 ---NA--- 124 0     0      
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