Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 1901 - 2000:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig01901 ---NA--- 251 0     0      
contig01902 aldo-keto reductase family member a2 813 20 6.30E-85 87.40% 6 P:carbohydrate metabolic process; C:Golgi apparatus; F:electron carrier activity; C:mitochondrion; P:cellular aldehyde metabolic process; F:aldehyde reductase activity EC:1.1.1.21  
contig01903 ---NA--- 249 0     0      
contig01904 family with sequence similarity member c 760 20 9.32E-24 76.95% 3 P:negative regulation of signal transduction; C:extracellular region; C:signal recognition particle, endoplasmic reticulum targeting EC:3.6.5.4  
contig01905 ---NA--- 857 0     0      
contig01906 ---NA--- 372 0     0      
contig01907 ---NA--- 306 0     0      
contig01908 vacuolar atp synthase 16 kda proteolipid subunit 498 20 8.62E-57 98.10% 9 F:hydrogen ion transporting ATP synthase activity, rotational mechanism; P:ATP synthesis coupled proton transport; F:metal ion binding; C:vacuolar membrane; F:ATP binding; C:membrane attack complex; F:protein binding; F:proton-transporting ATPase activity, rotational mechanism; C:proton-transporting two-sector ATPase complex EC:3.6.3.14  
contig01909 maf1 homolog ( cerevisiae) 285 20 2.44E-32 97.40% 4 F:transcription regulator activity; P:negative regulation of transcription from RNA polymerase III promoter; P:transcription antitermination; C:nucleus    
contig01910 zinc metallopeptidase (ste24 cerevisiae) 919 20 1.04E-129 89.55% 8 C:Golgi membrane; C:endoplasmic reticulum membrane; P:nuclear envelope organization; F:metalloexopeptidase activity; F:metalloendopeptidase activity; P:prenylated protein catabolic process; C:integral to membrane; F:zinc ion binding EC:3.4.24.0  
contig01911 ---NA--- 260 0     0      
contig01912 ---NA--- 416 0     0      
contig01913 ---NA--- 331 0     0      
contig01914 h+ lysosomal v1 subunit a 447 20 3.25E-45 97.05% 11 P:cellular sodium ion homeostasis; F:hydrogen ion transporting ATP synthase activity, rotational mechanism; C:mitochondrion; P:response to salt stress; P:ATP synthesis coupled proton transport; F:metal ion binding; P:response to acidity; P:cellular calcium ion homeostasis; F:ATP binding; F:proton-transporting ATPase activity, rotational mechanism; C:proton-transporting two-sector ATPase complex EC:3.6.3.14  
contig01915 ---NA--- 271 0     0      
contig01916 phosphoglucomutase 1 851 20 3.33E-39 91.95% 4 C:cytoplasm; P:cellular calcium ion homeostasis; P:glucose metabolic process; F:phosphoglucomutase activity EC:5.4.2.2  
contig01917 acyl- synthetase long-chain family member 4 433 20 1.03E-43 85.45% 8 C:microsome; C:peroxisome; P:regulation of fatty acid metabolic process; F:long-chain-fatty-acid-CoA ligase activity; F:magnesium ion binding; C:integral to membrane; C:endoplasmic reticulum; C:mitochondrion EC:6.2.1.3  
contig01918 ubiquitin specific protease 4 636 20 8.71E-29 78.35% 3 P:ubiquitin-dependent protein catabolic process; F:ubiquitin thiolesterase activity; C:nucleus EC:3.1.2.15  
contig01919 si:dkey- protein 358 7 6.94E-48 76.71% 2 F:F; C:C    
contig01920 ---NA--- 253 0     0      
contig01921 ---NA--- 278 0     0      
contig01922 oxidation resistance 1 549 20 2.71E-29 85.45% 4 C:nucleolus; P:response to oxidative stress; P:cell wall macromolecule catabolic process; C:mitochondrion    
contig01923 mitochondrial ribosomal protein l33 269 20 4.40E-26 84.30% 4 C:ribosome; F:structural constituent of ribosome; P:translation; C:mitochondrion EC:3.6.5.3  
contig01924 mitochondrial aldehyde dehydrogenase 2 538 11 3.66E-04 93.36% 5 C:mitochondrion; F:oxidoreductase activity; C:mitochondrial matrix; P:metabolic process; F:aldehyde dehydrogenase (NAD) activity    
contig01925 cell division cycle protein 27 homolog 600 20 2.29E-17 96.30% 7 P:cell proliferation; F:protein binding; C:centrosome; C:nucleus; P:mitotic metaphase/anaphase transition; C:spindle microtubule; P:cell division    
contig01926 phosphoribosyl pyrophosphate amidotransferase 977 20 1.13E-177 91.15% 8 P:purine nucleotide biosynthetic process; P:glutamine metabolic process; P:purine base biosynthetic process; F:iron ion binding; F:amidophosphoribosyltransferase activity; F:magnesium ion binding; P:nucleoside metabolic process; F:4 iron, 4 sulfur cluster binding EC:2.4.2.14  
contig01927 na+ k+ alpha 1 polypeptide 501 20 7.04E-30 99.00% 23 P:otolith development; P:sodium ion transport; F:sodium:potassium-exchanging ATPase activity; P:sperm motility; F:potassium ion binding; P:brain development; P:potassium ion transport; F:monovalent inorganic cation transmembrane transporter activity; F:potassium channel inhibitor activity; F:ATP binding; P:embryonic heart tube development; C:membrane attack complex; F:magnesium ion binding; P:metabolic process; P:determination of left/right symmetry; P:regulation of cellular pH; P:embryonic body morphogenesis; P:cardiac cell differentiation; P:otic vesicle formation; P:midbrain-hindbrain boundary development; F:sodium ion binding; C:integral to plasma membrane; F:potassium channel activity EC:3.6.3.9  
contig01928 conserved domain 265 20 2.67E-31 67.45% 0      
contig01929 nudix-type motif 8 1333 20 2.06E-56 69.00% 2 F:metal ion binding; C:mitochondrion    
contig01930 cellular nucleic acid-binding protein 1472 20 3.61E-81 81.90% 10 C:cytosol; F:RNA binding; P:positive regulation of transcription from RNA polymerase II promoter; F:metal ion binding; F:transcription factor activity; F:single-stranded DNA binding; P:positive regulation of cell proliferation; P:cholesterol biosynthetic process; C:endoplasmic reticulum; C:nucleus    
contig01931 novel protein vertebrate wee1 homolog ( pombe) 633 10 5.01E-53 71.60% 2 F:protein kinase activity; F:nucleotide binding    
contig01932 exportin 6 358 20 1.60E-36 87.85% 6 C:cytoplasm; C:nuclear pore; P:protein import into nucleus, docking; F:protein binding; F:protein transporter activity; P:protein export from nucleus    
contig01933 fatty acyl reductase 1 570 20 4.15E-39 88.35% 5 F:binding; F:long-chain-fatty-acyl-CoA reductase activity; P:wax biosynthetic process; C:peroxisomal membrane; C:integral to membrane EC:1.2.1.50  
contig01934 nucleoporin 85 2016 20 0 82.75% 8 C:nuclear pore; F:CCR2 chemokine receptor binding; P:macrophage chemotaxis; P:lamellipodium assembly; P:intracellular protein transmembrane transport; P:cytokine-mediated signaling pathway; C:plasma membrane; P:mRNA transport    
contig01935 s-adenosylhomocysteine hydrolase 887 20 7.97E-19 87.50% 14 C:cytosol; F:NAD or NADH binding; F:copper ion binding; F:adenyl nucleotide binding; P:circadian sleep/wake cycle; P:chronic inflammatory response to antigenic stimulus; P:response to nutrient; P:S-adenosylhomocysteine catabolic process; F:identical protein binding; F:adenosylhomocysteinase activity; F:protein self-association; P:one-carbon metabolic process; C:synaptosome; C:nucleus EC:3.3.1.1  
contig01936 nadh dehydrogenase 1 alpha subcomplex subunit 13 676 20 1.92E-56 90.30% 13 P:transport; P:negative regulation of translation; P:oxygen and reactive oxygen species metabolic process; F:NADH dehydrogenase (ubiquinone) activity; C:mitochondrial respiratory chain complex I; C:integral to membrane; P:negative regulation of cell growth; P:apoptotic nuclear change; F:protein binding; P:induction of apoptosis by extracellular signals; C:nucleoplasm; P:negative regulation of transcription, DNA-dependent; P:electron transport EC:1.6.5.3  
contig01937 growth arrest and dna-damage- gamma interacting protein 1 642 20 5.40E-34 76.30% 1 F:protein binding    
contig01938 h+ lysosomal accessory protein 2 1178 20 6.57E-48 88.25% 7 P:positive regulation of transforming growth factor-beta1 production; F:receptor activity; F:protein binding; C:external side of plasma membrane; C:integral to membrane; P:angiotensin maturation; P:regulation of MAPKKK cascade    
contig01939 unnamed protein product [Tetraodon nigroviridis] 288 1 4.25E-28 83.00% 0      
contig01940 ---NA--- 255 0     0      
contig01941 ---NA--- 242 0     0      
contig01942 phosphoserine aminotransferase 1 950 20 1.33E-135 88.90% 4 F:pyridoxal phosphate binding; F:O-phospho-L-serine:2-oxoglutarate aminotransferase activity; P:L-serine biosynthetic process; P:pyridoxine biosynthetic process EC:2.6.1.52  
contig01943 ---NA--- 658 0     0      
contig01944 ---NA--- 361 0     0      
contig01945 transcription termination rna polymerase i 285 19 1.39E-11 64.16% 12 F:chromatin binding; P:chromatin remodeling; P:positive regulation of transcription from RNA polymerase II promoter; C:nucleus; F:DNA binding; P:transcription initiation from RNA polymerase I promoter; P:regulation of transcription, DNA-dependent; F:RNA polymerase I transcription termination factor activity; P:negative regulation of DNA replication; P:transcription termination; F:protein binding; P:transcription    
contig01946 wu:fd60e07 protein 834 3 1.67E-11 67.00% 0      
contig01947 ---NA--- 1138 0     0      
contig01948 60s acidic ribosomal protein p2 443 20 3.09E-19 83.10% 4 F:structural constituent of ribosome; F:RNA binding; C:cytosolic large ribosomal subunit; P:translational elongation    
contig01949 ---NA--- 360 0     0      
contig01950 rio kinase 2 595 20 4.16E-40 92.25% 3 P:protein amino acid phosphorylation; F:ATP binding; F:protein serine/threonine kinase activity EC:2.7.11.0  
contig01951 tp53 regulated inhibitor of apoptosis 1 308 20 3.32E-34 89.20% 5 F:protein binding; F:caspase inhibitor activity; P:anti-apoptosis; P:DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest; C:mitochondrion    
contig01952 ---NA--- 723 0     0      
contig01953 mitogen-activated protein kinase kinase 4 608 20 2.87E-105 96.25% 6 P:protein amino acid phosphorylation; F:protein binding; P:JNK cascade; F:ATP binding; F:protein tyrosine kinase activity; F:protein serine/threonine kinase activity EC:2.7.10.0; EC:2.7.11.0  
contig01954 ---NA--- 247 0     0      
contig01955 eukaryotic translation initiation factor subunit 5 47kda 930 20 3.54E-141 89.40% 4 C:eukaryotic translation initiation factor 3 complex; F:protein binding; P:regulation of translational initiation; F:translation initiation factor activity    
contig01956 trna splicing endonuclease 2 homolog ( cerevisiae) 772 20 4.00E-62 80.70% 5 F:DNA binding; P:tRNA splicing, via endonucleolytic cleavage and ligation; P:mRNA processing; C:tRNA-intron endonuclease complex; F:tRNA-intron endonuclease activity EC:3.1.27.9  
contig01957 ---NA--- 934 0     0      
contig01958 ---NA--- 762 0     0      
contig01959 mitogen-activated protein kinase kinase kinase 7 interacting protein 3 293 20 1.93E-21 81.95% 3 F:kinase activity; F:zinc ion binding; C:intracellular    
contig01960 mitogen-activated protein kinase kinase kinase 7 interacting protein 3 401 20 1.41E-56 61.55% 1 F:metal ion binding    
contig01961 lyr motif-containing protein 1 205 1 8.04E-04 76.00% 0      
contig01962 ---NA--- 200 0     0      
contig01963 ---NA--- 324 0     0      
contig01964 chaperonin containing subunit 6a (zeta 1) 629 20 1.27E-93 95.30% 4 P:protein folding; C:cytoplasm; F:unfolded protein binding; F:ATP binding    
contig01965 chromosome 3 open reading frame 37 1323 20 6.64E-132 70.00% 2 F:F; P:P    
contig01966 yip1 domain member 6 1180 20 6.73E-93 87.15% 2 C:membrane attack complex; C:endoplasmic reticulum    
contig01967 atp-binding sub-family g member 2 1334 20 1.30E-151 76.85% 6 P:response to drug; F:xenobiotic-transporting ATPase activity; P:transport; F:ATP binding; C:integral to membrane; F:protein homodimerization activity EC:3.6.3.44  
contig01968 eukaryotic translation initiation factor 4e 1045 20 1.88E-64 92.40% 7 C:cytoplasm; F:RNA 7-methylguanosine cap binding; P:translational initiation; F:protein binding; F:translation initiation factor activity; P:regulation of translation; C:nucleus    
contig01969 spindle and kt associated 1 507 20 7.97E-13 87.00% 3 P:mitosis; C:spindle; P:cell division    
contig01970 ---NA--- 433 0     0      
contig01971 sphingomyelin phosphodiesterase isoform cra_a 953 20 7.19E-97 69.00% 7 C:integral to membrane; P:sphingomyelin catabolic process; F:sphingomyelin phosphodiesterase activity; P:peptide hormone secretion; P:signal transduction; P:response to stress; C:Golgi cis cisterna EC:3.1.4.12  
contig01972 psmd1 protein 359 20 2.16E-41 99.00% 3 C:cytosol; F:binding; C:protein complex    
contig01973 mkiaa1931 protein 569 20 6.97E-39 87.20% 0      
contig01974 mitogen-activated protein-binding protein-interacting protein 684 20 1.54E-16 99.25% 5 P:activation of MAPKK activity; F:protein binding; C:membrane attack complex; C:late endosome membrane; C:lysosomal membrane    
contig01975 ---NA--- 263 0     0      
contig01976 ---NA--- 163 0     0      
contig01977 tata box binding protein -associated rna polymerase b 627 20 1.35E-31 55.90% 4 P:transcription, DNA-dependent; F:transcription regulator activity; F:protein binding; C:nucleus    
contig01978 tfiis central domain-containing protein 1 717 20 1.27E-64 72.90% 7 F:transcription elongation regulator activity; P:transcription; F:transcription regulator activity; F:protein binding; P:regulation of transcription from RNA polymerase II promoter; F:DNA binding; C:nucleus    
contig01979 plasminogen activator inhibitor type member 2 isoform 3 732 20 7.92E-17 91.70% 1 F:serine-type endopeptidase inhibitor activity    
contig01980 phospholipase a2-activating protein 673 20 2.81E-84 74.20% 5 P:signal transduction; P:inflammatory response; F:phospholipase A2 activator activity; P:phospholipid metabolic process; F:protein binding    
contig01981 m-phase phosphoprotein 6 441 20 2.96E-46 83.35% 5 C:cytoplasm; C:nucleus; P:regulation of cell cycle; F:protein binding; P:M phase of mitotic cell cycle    
contig01982 pumilio 1 278 20 2.16E-17 93.50% 2 F:RNA binding; P:regulation of translation    
contig01983 non-protein coding rna 153 845 4 2.51E-47 49.00% 2 P:P; C:C    
contig01984 adp-ribosylation-like factor 6 interacting protein 4 307 1 3.24E-05 76.00% 2 F:F; C:C    
contig01985 low density lipoprotein receptor adaptor protein 1 737 20 3.09E-42 64.95% 14 C:cytosol; P:regulation of protein binding; C:basal plasma membrane; P:positive regulation of receptor-mediated endocytosis; F:protein C-terminus binding; F:phosphotyrosine binding; F:clathrin binding; C:early endosome; C:AP-2 adaptor complex; F:receptor signaling complex scaffold activity; P:cholesterol homeostasis; P:steroid metabolic process; ; C:AP-1 adaptor complex    
contig01986 ---NA--- 279 0     0      
contig01987 ---NA--- 694 0     0      
contig01988 phosphohistidine phosphatase 1 304 20 3.25E-13 84.25% 5 C:cytoplasm; F:hydrolase activity; P:P; C:C; F:phosphoprotein phosphatase activity    
contig01989 glutamate-cysteine catalytic subunit 764 20 1.00E-33 85.40% 26 P:response to arsenic; ; P:regulation of mitochondrial depolarization; P:response to nitrosative stress; P:response to xenobiotic stimulus; P:L-ascorbic acid metabolic process; F:ADP binding; C:cytosol; F:protein heterodimerization activity; P:anti-apoptosis; P:negative regulation of neuron apoptosis; P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process; P:cysteine metabolic process; F:glutamate binding; F:coenzyme binding; F:magnesium ion binding; C:glutamate-cysteine ligase complex; P:response to heat; P:negative regulation of transcription; P:glutamate metabolic process; P:negative regulation of protein ubiquitination; P:glutathione biosynthetic process; P:response to hormone stimulus; P:regulation of blood vessel size; P:response to oxidative stress; F:glutamate-cysteine ligase activity EC:6.3.2.2  
contig01990 deaminase domain containing 1 402 20 2.27E-14 88.80% 4 F:hydrolase activity; P:zinc ion transport; F:zinc ion binding; P:tRNA processing    
contig01991 wd repeat domain 4 397 20 1.01E-54 77.80% 2 C:extracellular space; C:nucleoplasm    
contig01992 ---NA--- 415 0     0      
contig01993 zinc finger protein 294 243 20 6.26E-41 97.25% 2 F:zinc ion binding; F:protein binding    
contig01994 uncharacterized conserved protein 593 20 5.56E-29 57.70% 2 C:mitochondrion; F:F    
contig01995 coenzyme q10 homolog a 638 20 5.44E-39 79.95% 1 C:mitochondrion    
contig01996 isoleucyl-trna synthetase 476 20 1.65E-41 94.05% 5 C:cytoplasm; C:soluble fraction; P:isoleucyl-tRNA aminoacylation; F:ATP binding; F:isoleucine-tRNA ligase activity EC:6.1.1.5  
contig01997 membrane-associated ring finger 7 1148 20 1.83E-63 77.90% 1 F:metal ion binding    
contig01998 high-mobility group 20a 251 20 1.07E-16 93.75% 5 P:chromatin modification; F:protein binding; F:transcription factor activity; C:nucleus; P:regulation of transcription, DNA-dependent    
contig01999 splicing arginine serine-rich 5 1486 20 8.45E-70 83.55% 7 P:mRNA splice site selection; C:spliceosomal complex; F:RNA binding; F:protein binding; P:regulation of cell cycle; P:regulation of transcription, DNA-dependent; F:nucleotide binding    
contig02000 preimplantation protein 4 456 20 1.21E-60 80.40% 4 P:glycerol metabolic process; P:carbohydrate metabolic process; F:glycerophosphodiester phosphodiesterase activity; F:carbohydrate binding EC:3.1.4.46  
100 Rows returned.
Go to records:
1-100, 101-200, 201-300, 301-400, 401-500, 501-600, 601-700, 701-800, 801-900, 901-1000, 1001-1100, 1101-1200, 1201-1300, 1301-1400, 1401-1500, 1501-1600, 1601-1700, 1701-1800, 1801-1900, 1901-2000, 2001-2100, 2101-2200, 2201-2300, 2301-2400, 2401-2500, 2501-2600, 2601-2700, 2701-2800, 2801-2900, 2901-3000, 3001-3100, 3101-3200, 3201-3300, 3301-3400, 3401-3500, 3501-3600, 3601-3700, 3701-3800, 3801-3900, 3901-4000, 4001-4100, 4101-4200, 4201-4300, 4301-4400, 4401-4500, 4501-4600, 4601-4700, 4701-4800, 4801-4900, 4901-5000, 5001-5100, 5101-5200, 5201-5300, 5301-5400, 5401-5500, 5501-5600, 5601-5700, 5701-5800, 5801-5900, 5901-6000, 6001-6100, 6101-6200, 6201-6300, 6301-6400, 6401-6500, 6501-6600, 6601-6700, 6701-6800, 6801-6900, 6901-7000, 7001-7100, 7101-7200, 7201-7300, 7301-7400, 7401-7500, 7501-7600, 7601-7700, 7701-7800, 7801-7900, 7901-8000, 8001-8100, 8101-8200, 8201-8300, 8301-8400, 8401-8500, 8501-8600, 8601-8700, 8701-8800, 8801-8900, 8901-9000, 9001-9100, 9101-9200, 9201-9300, 9301-9400, 9401-9500, 9501-9600, 9601-9700, 9701-9800, 9801-9900, 9901-10000, 10001-10100, 10101-10200, 10201-10300, 10301-10400, 10401-10500, 10501-10600, 10601-10700, 10701-10800, 10801-10900, 10901-11000, 11001-11100, 11101-11200, 11201-11208

Web Access Statistics © 2003-2025 NAGRP - Bioinformatics Coordination Program.
Contact: NAGRP Bioinformatics Team
Helpdesk