Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 1801 - 1900:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig01801 20s rrna homolog 590 20 2.60E-63 62.25% 2 C:nucleolus; P:ribosome assembly    
contig01802 mitochondrial translational release factor 1 719 20 1.49E-89 83.85% 3 F:translation release factor activity; P:regulation of translational termination; C:mitochondrion    
contig01803 squamous cell carcinoma antigen recognized by t cells 582 20 1.48E-63 96.55% 7 C:cytosol; P:cell cycle arrest; P:positive regulation of cytotoxic T cell differentiation; P:RNA splicing; P:induction of apoptosis by intracellular signals; C:spliceosomal complex; P:mRNA processing    
contig01804 transcription factor dp-1 806 20 5.59E-78 85.00% 10 P:S phase of mitotic cell cycle; P:regulation of transcription from RNA polymerase II promoter; P:apoptosis; C:transcription factor complex; P:epidermis development; F:transcription factor activity; P:transcription antitermination; F:transcription coactivator activity; P:positive regulation of transcription, DNA-dependent; P:cell proliferation    
contig01805 ---NA--- 244 0     0      
contig01806 ---NA--- 283 0     0      
contig01807 exosome component 9 281 20 1.50E-38 93.10% 7 C:cytoplasm; C:nucleolus; F:3'-5'-exoribonuclease activity; F:RNA binding; F:protein binding; P:rRNA processing; C:exosome (RNase complex)    
contig01808 ---NA--- 246 0     0      
contig01809 ---NA--- 223 0     0      
contig01810 delta-aminolevulinic acid dehydratase 699 20 2.02E-120 90.05% 3 P:heme biosynthetic process; F:porphobilinogen synthase activity; F:zinc ion binding EC:4.2.1.24  
contig01811 ---NA--- 832 0     0      
contig01812 ---NA--- 395 0     0      
contig01813 ribosomal protein s17 810 20 1.65E-69 98.00% 4 F:structural constituent of ribosome; F:RNA binding; C:cytosolic small ribosomal subunit; P:translation EC:3.6.5.3  
contig01814 ---NA--- 1123 0     0      
contig01815 rae1 rna export 1 homolog ( pombe) 257 20 1.26E-04 99.85% 9 C:nuclear pore; C:nuclear outer membrane; C:nucleus; C:cytoplasm; F:RNA binding; P:mRNA export from nucleus; F:protein binding; F:microtubule binding; C:cytoskeleton    
contig01816 suppressor of ty 5 homolog 253 20 5.10E-38 96.90% 12 P:cell cycle; P:positive regulation of transcription from RNA polymerase II promoter; P:retroviral genome replication; F:enzyme binding; P:negative regulation of transcription from RNA polymerase II promoter; F:positive transcription elongation factor activity; F:negative transcription elongation factor activity; P:RNA elongation from RNA polymerase II promoter; F:protein heterodimerization activity; P:chromatin remodeling; C:nucleus; P:response to organic substance    
contig01817 ---NA--- 529 0     0      
contig01818 chromosome 14 open reading frame 169 567 20 1.65E-39 67.35% 4 P:ribosome biogenesis; F:RNA binding; P:chromatin remodeling; C:nucleolar preribosome    
contig01819 ---NA--- 525 0     0      
contig01820 ---NA--- 651 0     0      
contig01821 origin recognition subunit 1-like 293 20 6.59E-38 91.00% 6 P:DNA replication; F:DNA binding; F:protein binding; F:ATP binding; F:nucleoside-triphosphatase activity; C:nucleus EC:3.6.1.15  
contig01822 member ras oncogene family 418 20 1.74E-46 97.05% 8 F:GTP binding; C:Golgi apparatus; C:plasma membrane; F:ATP binding; P:intracellular protein transport; F:transcription factor binding; P:small GTPase mediated signal transduction; P:regulation of transcription, DNA-dependent    
contig01823 importin 7 254 20 2.00E-42 84.15% 5 C:cytoplasm; C:nuclear pore; P:protein import into nucleus, docking; F:histone binding; F:protein transporter activity    
contig01824 topoisomerase i 517 20 1.89E-36 89.65% 13 C:cytoplasm; C:nucleolus; F:DNA topoisomerase type I activity; C:nucleoplasm; P:response to drug; F:DNA topoisomerase (ATP-hydrolyzing) activity; F:protein binding; C:perikaryon; P:embryonic cleavage; P:DNA unwinding involved in replication; F:chromatin DNA binding; C:chromosome; P:DNA topological change EC:5.99.1.2; EC:5.99.1.3  
contig01825 ---NA--- 290 0     0      
contig01826 ---NA--- 104 0     0      
contig01827 ---NA--- 263 0     0      
contig01828 histidine triad protein member 5 285 20 2.44E-40 84.35% 6 C:cytoplasm; F:protein binding; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; F:hydrolase activity; C:nucleus; P:deadenylation-dependent decapping of nuclear-transcribed mRNA    
contig01829 cold shock domain-containing protein e1 470 20 4.39E-42 89.50% 4 C:mitochondrial inner membrane; F:DNA binding; F:RNA binding; P:regulation of transcription, DNA-dependent    
contig01830 narg2 protein 742 20 9.12E-37 72.35% 1 C:nucleus    
contig01831 zinc cchc domain containing 10 1141 20 5.51E-28 94.85% 2 F:zinc ion binding; F:nucleic acid binding    
contig01832 ---NA--- 248 0     0      
contig01833 syntaxin 12 302 20 2.84E-33 94.10% 9 C:phagocytic vesicle; F:SNAP receptor activity; C:Golgi apparatus; P:cholesterol efflux; C:membrane raft; P:vesicle-mediated transport; P:intracellular protein transport; P:protein stabilization; C:integral to membrane    
contig01834 ---NA--- 251 0     0      
contig01835 chmp member 7 611 20 1.43E-33 83.40% 2 P:protein transport; C:cytoplasm    
contig01836 ethylmalonic encephalopathy 1 339 20 3.22E-13 81.75% 1 F:hydrolase activity    
contig01837 ---NA--- 243 0     0      
contig01838 mitochondrial ribosomal protein l22 1026 20 3.34E-50 87.75% 5 C:mitochondrial ribosome; P:ribosome biogenesis; F:structural constituent of ribosome; C:large ribosomal subunit; P:translation EC:3.6.5.3  
contig01839 ---NA--- 269 0     0      
contig01840 aconitase mitochondrial 935 20 1.38E-162 89.35% 6 P:citrate metabolic process; F:iron ion binding; P:tricarboxylic acid cycle; F:4 iron, 4 sulfur cluster binding; F:aconitate hydratase activity; C:mitochondrion EC:4.2.1.3  
contig01841 protein regulator of cytokinesis 1 864 20 2.40E-93 75.25% 5 P:mitotic spindle elongation; F:protein binding; P:cytokinesis; C:nucleus; C:spindle microtubule    
contig01842 ---NA--- 264 0     0      
contig01843 ubx domain containing 8 487 20 3.13E-72 97.25% 2 F:protein binding; C:cytoplasm    
contig01844 ---NA--- 265 0     0      
contig01845 hus1 checkpoint homolog ( pombe) 299 20 1.08E-32 84.40% 11 P:response to UV; P:G1/S transition checkpoint; F:protein serine/threonine kinase activity; P:negative regulation of DNA replication; P:double-strand break repair via homologous recombination; P:embryonic development; F:protein binding; P:DNA damage checkpoint; C:cytoplasm; C:nucleus; P:protein amino acid phosphorylation EC:2.7.11.0  
contig01846 chaperonin containing subunit 3 719 20 4.30E-121 93.60% 6 C:cytoplasm; P:protein folding; F:ATP binding; P:negative regulation of retinal cell programmed cell death; F:unfolded protein binding; P:embryonic eye morphogenesis    
contig01847 ---NA--- 260 0     0      
contig01848 ---NA--- 339 0     0      
contig01849 nuclear cap binding protein subunit 20kda 542 20 4.99E-33 93.35% 8 P:snRNA export from nucleus; P:RNA splicing; F:protein binding; P:mRNA transport; F:RNA cap binding; C:nucleus; P:positive regulation of RNA export from nucleus; F:nucleotide binding    
contig01850 mis12 homolog 726 20 1.03E-69 64.90% 2 P:cell cycle; C:chromosome, centromeric region    
contig01851 mitochondrial ribosomal protein l37 946 20 4.16E-105 73.05% 4 F:translation regulator activity; C:mitochondrial ribosome; F:structural constituent of ribosome; P:translation EC:3.6.5.3  
contig01852 peroxisome biogenesis factor 26 527 20 5.47E-63 67.75% 5 P:protein import into peroxisome matrix; C:peroxisome; F:protein complex binding; C:membrane; F:protein C-terminus binding    
contig01853 ---NA--- 615 0     0      
contig01854 ---NA--- 244 0     0      
contig01855 proteasome maturation protein 753 20 8.19E-65 90.65% 4 P:immune response; C:cytosol; C:protein complex; C:nucleus    
contig01856 guanine nucleotide binding alpha transducing 3 1385 20 7.23E-145 67.20% 5 C:heterotrimeric G-protein complex; F:GTP binding; P:sensory perception of taste; P:G-protein coupled receptor protein signaling pathway; F:GTPase activity EC:3.6.5.1; EC:3.6.5.2; EC:3.6.5.3; EC:3.6.5.4  
contig01857 ---NA--- 259 0     0      
contig01858 protein tyrosine phosphatase-like a domain containing 1 476 20 7.16E-53 82.05% 4 P:JNK cascade; C:integral to membrane; P:I-kappaB kinase/NF-kappaB cascade; P:Rho protein signal transduction    
contig01859 5 -nucleotidase domain containing 2 398 20 1.67E-57 86.85% 2 F:F; C:C    
contig01860 peptidoglycan- domain containing 2 367 20 6.46E-22 62.60% 3 F:F; P:cell wall macromolecule catabolic process; C:C    
contig01861 n-myristoyltransferase 2 503 20 1.43E-43 95.20% 4 C:cytoplasm; P:protein lipoylation; P:N-terminal peptidyl-glycine N-myristoylation; F:glycylpeptide N-tetradecanoyltransferase activity EC:2.3.1.97  
contig01862 comm domain containing 2 443 20 7.87E-15 80.20% 1 F:protein binding    
contig01863 nucleolar complex associated 3 homolog 352 20 7.27E-29 91.65% 3 C:nucleolus; P:fat cell differentiation; C:nuclear speck    
contig01864 ---NA--- 520 0     0      
contig01865 ---NA--- 328 0     0      
contig01866 ---NA--- 255 0     0      
contig01867 imp (inosine monophosphate) dehydrogenase 2 537 20 1.63E-20 97.60% 5 F:IMP dehydrogenase activity; P:GMP biosynthetic process; F:protein binding; F:potassium ion binding; P:lymphocyte proliferation EC:1.1.1.205  
contig01868 replication factor c (activator 1) 3 418 20 1.16E-66 92.75% 7 P:DNA replication; F:ATPase activity; F:DNA binding; C:DNA replication factor C complex; F:protein binding; F:ATP binding; C:nucleus    
contig01869 neural precursor cell developmentally down-regulated 1 661 4 4.82E-33 65.00% 2 F:F; P:P    
contig01870 ubiquitin specific protease 4 394 20 4.14E-56 93.85% 5 C:cytoplasm; P:ubiquitin-dependent protein catabolic process; F:ubiquitin thiolesterase activity; P:ubiquitin cycle; C:nucleus EC:3.1.2.15  
contig01871 ---NA--- 243 0     0      
contig01872 drebrin- isoform cra_b 407 20 2.33E-27 97.80% 14 C:ruffle; P:actin filament bundle assembly; P:barbed-end actin filament capping; C:dendrite; F:protein C-terminus binding; F:actin filament binding; F:identical protein binding; P:actin filament severing; P:immune response; C:cell cortex; P:endocytosis; C:lamellipodium; P:Rac protein signal transduction; C:postsynaptic density    
contig01873 ---NA--- 687 0     0      
contig01874 ---NA--- 258 0     0      
contig01875 heavy neurofilament protein 1043 6 4.38E-05 40.33% 0      
contig01876 kinesin family member 23 785 20 2.66E-85 76.70% 12 P:mitotic spindle elongation; P:microtubule-based movement; F:protein binding; P:mitosis; P:cytokinesis; P:embryonic cleavage; C:spindle; F:ATP binding; C:nucleus; C:kinesin complex; F:microtubule motor activity; C:microtubule    
contig01877 eukaryotic translation initiation factor subunit 10 1234 20 9.00E-19 49.80% 9 C:eukaryotic translation initiation factor 3 complex; P:regulation of translational initiation; C:nucleus; C:cytoplasm; P:translation; F:protein binding; F:translation initiation factor activity; P:P; F:structural molecule activity    
contig01878 ---NA--- 283 0     0      
contig01879 family with sequence similarity member b 440 20 7.32E-58 89.40% 0      
contig01880 ---NA--- 276 0     0      
contig01881 set bifurcated 2 808 20 2.61E-83 74.75% 5 P:chromatin modification; F:DNA binding; F:histone-lysine N-methyltransferase activity; C:nucleus; F:zinc ion binding EC:2.1.1.43  
contig01882 serine incorporator 1 377 20 7.29E-29 82.05% 2 C:membrane; F:electron carrier activity    
contig01883 ---NA--- 860 0     0      
contig01884 alpha3-fucosyltransferase [Takifugu rubripes] 654 1 1.21E-04 91.00% 7 P:protein amino acid glycosylation; F:fucosyltransferase activity; F:transferase activity; C:integral to membrane; C:membrane; C:Golgi apparatus; F:transferase activity, transferring glycosyl groups    
contig01885 chromosome 9 open reading frame 156 732 20 9.48E-87 85.95% 1 F:hydrolase activity    
contig01886 exosome component 6 324 13 4.57E-15 76.54% 6 F:RNA binding; C:cytoplasm; P:RNA processing; C:nucleus; C:exosome (RNase complex); F:exonuclease activity    
contig01887 upregulated during skeletal muscle growth 5 639 7 8.27E-19 69.71% 4 C:mitochondrion; C:integral to membrane; C:membrane; C:mitochondrial inner membrane    
contig01888 ---NA--- 383 0     0      
contig01889 argininosuccinate lyase 323 20 9.17E-48 84.00% 13 P:response to hypoxia; P:arginine catabolic process; P:liver development; F:argininosuccinate lyase activity; P:response to nutrient; P:arginine biosynthetic process via ornithine; P:urea cycle; P:response to peptide hormone stimulus; P:response to glucocorticoid stimulus; P:kidney development; C:cytoplasm; P:response to cAMP; P:argininosuccinate metabolic process EC:4.3.2.1  
contig01890 14-3-3 protein beta alpha 1501 20 7.19E-101 87.70% 5 F:protein domain specific binding; F:monooxygenase activity; C:melanosome; P:protein targeting; C:perinuclear region of cytoplasm    
contig01891 ---NA--- 263 0     0      
contig01892 unnamed protein product [Tetraodon nigroviridis] 1426 4 1.57E-25 71.75% 0      
contig01893 flavohemoprotein b5 b5r 318 20 4.15E-32 76.15% 7 C:cytoplasm; F:cytochrome-b5 reductase activity; P:heme biosynthetic process; P:cellular iron ion homeostasis; F:iron ion binding; F:heme binding; P:iron ion transport EC:1.6.2.2  
contig01894 cdc5 cell division cycle 5-like ( pombe) 1139 20 1.08E-108 83.30% 12 F:RNA binding; P:cell cycle; P:regulation of transcription, DNA-dependent; C:nuclear speck; P:RNA splicing; P:cell division; F:DNA binding; P:protein targeting; C:spliceosomal complex; F:protein domain specific binding; P:mRNA processing; C:cytoplasm    
contig01895 bcs1-like 256 20 5.24E-43 90.35% 7 P:protein complex assembly; C:mitochondrial respiratory chain complex III; P:sensory perception of sound; C:membrane attack complex; F:ATP binding; F:nucleoside-triphosphatase activity; P:energy derivation by oxidation of organic compounds EC:3.6.1.15  
contig01896 ---NA--- 263 0     0      
contig01897 ---NA--- 384 0     0      
contig01898 ---NA--- 165 0     0      
contig01899 ---NA--- 1088 0     0      
contig01900 gdp-mannose pyrophosphorylase a 245 20 3.56E-36 84.10% 3 P:biosynthetic process; F:nucleotidyltransferase activity; F:acyltransferase activity EC:2.7.7.0  
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