Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 1601 - 1700:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig01601 ---NA--- 468 0     0      
contig01602 ---NA--- 285 0     0      
contig01603 platelet-activating factor isoform alpha subunit 308 20 6.74E-49 77.55% 39 C:nonmotile primary cilium; P:neuron migration; P:retrograde axon cargo transport; P:apical protein localization; P:stem cell division; C:growth cone; P:learning or memory; C:insoluble fraction; P:lipid catabolic process; F:phosphoprotein binding; C:nuclear membrane; P:hippocampus development; P:photoreceptor cell maintenance; C:neuronal cell body; P:neuroblast proliferation; F:hydrolase activity; P:acrosome assembly; C:microtubule; P:layer formation in the cerebral cortex; C:motile primary cilium; P:vesicle transport along microtubule; F:microtubule binding; C:spindle; F:platelet-activating factor acetyltransferase activity; P:mitosis; C:centrosome; P:synaptic transmission; P:microtubule cytoskeleton organization; P:neuromuscular process controlling balance; C:microtubule associated complex; P:actin cytoskeleton organization; C:perinuclear region of cytoplasm; F:protein homodimerization activity; C:vesicular fraction; C:soluble fraction; C:cell leading edge; P:regulation of Rho GTPase activity; F:dynein intermediate chain binding; P:adult locomotory behavior EC:2.3.1.149  
contig01604 snail homolog 1 1028 20 1.27E-49 93.80% 11 P:mesodermal cell migration; P:hair follicle morphogenesis; F:zinc ion binding; P:epithelial to mesenchymal transition; P:zinc ion transport; P:regulation of transcription, DNA-dependent; F:protein binding; F:transcription factor activity; P:negative regulation of cell cycle; P:negative regulation of cell-cell adhesion; C:nucleus    
contig01605 ---NA--- 522 0     0      
contig01606 ---NA--- 331 0     0      
contig01607 casein kinase alpha 1 polypeptide 566 20 8.97E-105 96.15% 12 C:protein kinase CK2 complex; F:protein N-terminus binding; P:Wnt receptor signaling pathway; F:beta-catenin binding; F:protein phosphatase regulator activity; P:regulation of cell growth; F:protein kinase CK2 activity; F:ATP binding; P:regulation of cell proliferation; C:nucleus; C:plasma membrane; P:protein amino acid phosphorylation    
contig01608 ---NA--- 398 0     0      
contig01609 ---NA--- 373 0     0      
contig01610 myst histone acetyltransferase 1 766 20 4.43E-114 98.20% 13 F:zinc ion binding; P:regulation of transcription, DNA-dependent; P:chromatin assembly or disassembly; P:myeloid cell differentiation; C:kinetochore; C:chromatin; F:transcription factor binding; P:negative regulation of transcription; F:histone acetyltransferase activity; P:histone acetylation; F:chromatin binding; C:nucleus; P:positive regulation of transcription EC:2.3.1.48  
contig01611 hydrolethalus syndrome 1 386 20 2.39E-40 72.25% 1 C:nucleus    
contig01612 rna binding motif protein 26 280 20 4.33E-34 80.30% 3 F:zinc ion binding; F:nucleotide binding; F:RNA binding    
contig01613 ---NA--- 350 0     0      
contig01614 eukaryotic translation initiation factor subunit 2 38kda 371 20 1.39E-11 100.00% 2 P:translational initiation; F:translation initiation factor activity    
contig01615 coiled-coil-helix-coiled-coil-helix domain containing 3 1168 20 2.40E-34 71.70% 2 C:mitochondrial inner membrane; F:protein binding    
contig01616 ---NA--- 454 0     0      
contig01617 transient receptor potential cation subfamily member 4 associated protein 538 20 6.32E-73 87.95% 17 C:cytosol; F:peptide antigen binding; F:tapasin binding; P:cytosol to ER transport; F:peptide antigen-transporting ATPase activity; P:antigen processing and presentation of endogenous peptide antigen via MHC class I; F:MHC class I protein binding; F:TAP2 binding; P:protein complex assembly; P:peptide transport; F:ATP binding; C:endoplasmic reticulum lumen; F:phosphate binding; F:protein heterodimerization activity; F:protein homodimerization activity; P:intracellular protein transport; F:TAP1 binding    
contig01618 prp31 pre-mrna processing factor 31 homolog 1050 20 1.51E-146 96.40% 7 F:ribonucleoprotein binding; ; C:Cajal body; C:U4/U6 x U5 tri-snRNP complex; C:spliceosomal complex; F:protein binding; C:nuclear speck    
contig01619 glycine cleavage system h mitochondrial precursor 995 20 4.00E-77 81.85% 5 P:glycine catabolic process; F:aminomethyltransferase activity; F:lipoic acid binding; C:glycine cleavage complex; C:mitochondrion EC:2.1.2.10  
contig01620 imp1 inner mitochondrial membrane peptidase-like 640 20 1.17E-81 80.10% 5 C:mitochondrial inner membrane; C:integral to membrane; F:serine-type peptidase activity; P:proteolysis; F:signal peptidase activity    
contig01621 ---NA--- 744 0     0      
contig01622 ---NA--- 419 0     0      
contig01623 novel protein (zgc:66455) 1668 16 3.39E-62 59.63% 0      
contig01624 ---NA--- 947 0     0      
contig01625 splicing arginine serine-rich 1 266 20 1.73E-30 97.50% 10 C:nuclear speck; P:mRNA splice site selection; P:protein targeting; F:protein binding; C:spliceosomal complex; F:nucleotide binding; ; C:cytoplasm; P:in utero embryonic development; P:cardiac muscle contraction    
contig01626 ---NA--- 486 0     0      
contig01627 coenzyme q10 homolog b 377 20 3.16E-32 64.45% 1 C:mitochondrion    
contig01628 spna2 protein 342 20 1.59E-15 100.00% 0      
contig01629 ubiquitin a-52 residue ribosomal protein fusion product 1 508 20 3.01E-36 99.40% 5 C:ribosome; P:protein modification process; F:structural constituent of ribosome; C:nucleus; P:translation EC:3.6.5.3  
contig01630 basic leucine zipper and w2 domains 1 753 20 1.64E-119 91.60% 5 C:cytoplasm; P:regulation of translational initiation; P:transcription antitermination; F:translation initiation factor activity; P:regulation of transcription, DNA-dependent    
contig01631 ---NA--- 462 0     0      
contig01632 lsm14 homolog b 1655 20 6.11E-135 66.95% 2 F:F; C:C    
contig01633 shugoshin-like 1 800 4 8.38E-10 50.00% 0      
contig01634 arachidonate 12- 12r type 1192 20 1.85E-67 62.60% 4 P:lipid metabolic process; C:intracellular; P:negative regulation of cellular process; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen EC:1.13.11.0  
contig01635 ---NA--- 258 0     0      
contig01636 chromosome 14 open reading frame 153 581 20 1.36E-61 71.20% 1 P:induction of apoptosis by intracellular signals    
contig01637 spry domain containing 4 398 20 6.50E-53 77.70% 2 F:F; C:C    
contig01638 ---NA--- 949 0     0      
contig01639 ---NA--- 260 0     0      
contig01640 molybdenum cofactor synthesis 2 860 20 4.87E-70 71.05% 2 F:identical protein binding; P:Mo-molybdopterin cofactor biosynthetic process    
contig01641 tho complex 5 2292 20 0 81.95% 4 C:cytoplasm; F:protein binding; C:nucleus; P:negative regulation of macrophage differentiation    
contig01642 ---NA--- 739 0     0      
contig01643 ---NA--- 362 0     0      
contig01644 dead h (asp-glu-ala-asp his) box polypeptide 19 (dbp5 yeast) 561 20 5.65E-70 93.30% 3 F:nucleic acid binding; F:ATP binding; F:ATP-dependent helicase activity    
contig01645 ---NA--- 332 0     0      
contig01646 vaccinia related kinase 1 318 20 1.42E-48 86.60% 4 F:ATP binding; C:nucleus; P:protein amino acid autophosphorylation; F:protein serine/threonine kinase activity EC:2.7.11.0  
contig01647 ---NA--- 507 0     0      
contig01648 mitochondrial isoleucine trna synthetase 275 20 2.84E-09 88.45% 4 C:mitochondrial matrix; P:isoleucyl-tRNA aminoacylation; F:ATP binding; F:isoleucine-tRNA ligase activity EC:6.1.1.5  
contig01649 ---NA--- 155 0     0      
contig01650 family with sequence similarity member a 441 20 2.07E-23 84.55% 2 F:F; P:P    
contig01651 spindle pole body component 24 homolog 314 19 6.04E-20 74.42% 4 C:chromosome, centromeric region; P:mitosis; C:nucleus; F:protein binding    
contig01652 mitochondrial ribosomal protein s31 569 5 4.86E-16 61.60% 0      
contig01653 ---NA--- 365 0     0      
contig01654 stomatin-like protein 2 781 13 6.42E-07 72.54% 3 F:F; C:membrane; P:P    
contig01655 ---NA--- 469 0     0      
contig01656 sec23 interacting protein 260 20 1.87E-16 85.50% 1 F:metal ion binding    
contig01657 nucleolar protein 27kda 742 18 1.01E-19 63.33% 1 C:nucleus    
contig01658 rna binding homolog 1 244 20 1.83E-32 83.05% 3 P:germ cell development; C:intracellular; F:double-stranded RNA binding    
contig01659 breast carcinoma amplified sequence 2 1542 20 3.63E-108 91.45% 4 C:spliceosomal complex; ; P:RNA splicing; F:protein binding    
contig01660 dead (asp-glu-ala-asp) box polypeptide 52 1185 20 5.31E-130 89.00% 6 F:RNA helicase activity; F:ATP-dependent helicase activity; F:RNA binding; F:ATP binding; P:rRNA processing; C:nucleus    
contig01661 ---NA--- 248 0     0      
contig01662 wu:fa99c08 protein 374 4 1.48E-13 79.25% 0      
contig01663 biogenesis of lysosome-related organelles complex- subunit 2 1405 20 1.44E-51 89.25% 3 C:cytosol; C:centrosome; F:identical protein binding    
contig01664 glutamine synthetase 794 20 8.97E-113 95.30% 3 F:glutamate-ammonia ligase activity; C:mitochondrion; P:glutamine biosynthetic process EC:6.3.1.2  
contig01665 ---NA--- 277 0     0      
contig01666 ---NA--- 221 0     0      
contig01667 tetratricopeptide repeat domain 35 290 20 9.62E-13 92.80% 3 C:nucleus; F:binding; C:endoplasmic reticulum    
contig01668 cadherin epithelial 1737 20 0 59.90% 26 P:neuron migration; P:transport; P:neural tube formation; P:ectoderm development; P:germ cell migration; C:catenin complex; P:neuron projection development; P:response to organic substance; C:cell-cell adherens junction; P:cell migration involved in gastrulation; P:cell-cell adhesion; C:basolateral plasma membrane; C:microvillus; P:pituitary gland development; F:calcium ion binding; P:gastrulation with mouth forming second; C:integral to membrane; C:desmosome; P:response to drug; C:apical part of cell; P:response to toxin; P:protein homooligomerization; F:beta-catenin binding; P:synapse assembly; P:regulation of caspase activity; C:cell cortex    
contig01669 ---NA--- 285 0     0      
contig01670 dolichyl-diphosphooligosaccharide-protein glycosyltransferase 270 20 3.25E-21 86.20% 10 P:protein amino acid N-linked glycosylation via asparagine; C:integral to membrane; C:extracellular space; C:microsome; F:protein binding; P:response to cytokine stimulus; P:T cell activation; P:protein amino acid terminal N-glycosylation; F:dolichyl-diphosphooligosaccharide-protein glycotransferase activity; C:endoplasmic reticulum membrane EC:2.4.1.119  
contig01671 coiled-coil domain containing 93 453 20 6.68E-59 97.80% 2 F:F; C:C    
contig01672 beta 253 20 1.94E-29 70.50% 5 C:extracellular space; F:beta-lactamase activity; C:integral to membrane; P:beta-lactam antibiotic catabolic process; C:mitochondrion EC:3.5.2.6  
contig01673 ---NA--- 471 0     0      
contig01674 novel protein 615 20 1.60E-37 63.40% 0      
contig01675 ---NA--- 125 0     0      
contig01676 ---NA--- 252 0     0      
contig01677 ---NA--- 551 0     0      
contig01678 c1orf74 homolog 743 20 3.43E-68 58.05% 4 F:F; P:transcription; C:nucleus; C:C    
contig01679 ---NA--- 254 0     0      
contig01680 nadh dehydrogenase iron-sulfur protein mitochondrial precursor 784 20 1.71E-100 85.45% 9 P:transport; F:NADH dehydrogenase (ubiquinone) activity; C:mitochondrial respiratory chain complex I; F:4 iron, 4 sulfur cluster binding; P:mitochondrial electron transport, NADH to ubiquinone; F:protein binding; P:mitochondrial respiratory chain complex I assembly; F:iron ion binding; P:electron transport EC:1.6.5.3  
contig01681 mitochondrial ribosomal protein s28 729 20 1.20E-41 65.10% 1 C:mitochondrial small ribosomal subunit    
contig01682 ---NA--- 276 0     0      
contig01683 dna replication complex gins protein psf2 557 20 3.03E-28 86.00% 4 F:transcription elongation regulator activity; C:nucleus; P:DNA strand elongation involved in DNA replication; F:protein binding    
contig01684 heat shock protein 9 458 20 2.29E-59 99.05% 9 P:protein folding; P:hemopoiesis; P:protein export from nucleus; C:cell surface; F:ATP binding; F:ATPase activity; C:mitochondrial matrix; F:unfolded protein binding; P:response to stress    
contig01685 programmed cell death 4 542 20 9.11E-27 83.15% 6 P:apoptosis; F:RNA binding; C:cytoplasm; P:negative regulation of cell cycle; C:nucleus; F:protein binding    
contig01686 ras-like family 11 member b 1700 20 1.25E-104 75.70% 2 F:GTP binding; P:small GTPase mediated signal transduction    
contig01687 xbp1 protein 600 4 1.82E-06 92.50% 6 P:regulation of transcription, DNA-dependent; F:sequence-specific DNA binding; F:protein dimerization activity; F:transcription regulator activity; F:transcription factor activity; F:DNA binding    
contig01688 ---NA--- 739 0     0      
contig01689 isoform cra_a 862 20 4.70E-97 92.60% 1 F:protein binding    
contig01690 lim domain binding 1 252 20 3.64E-44 100.00% 11 P:anterior/posterior axis specification; P:negative regulation of erythrocyte differentiation; P:Wnt receptor signaling pathway; F:transcription cofactor activity; C:protein complex; P:positive regulation of transcription from RNA polymerase II promoter; F:LIM domain binding; F:transcription activator activity; F:protein homodimerization activity; P:neuron differentiation; C:nucleus    
contig01691 ---NA--- 486 0     0      
contig01692 ---NA--- 271 0     0      
contig01693 ---NA--- 147 0     0      
contig01694 wolf-hirschhorn syndrome candidate 2 751 20 5.64E-58 95.10% 3 P:multicellular organismal development; C:nucleus; P:regulation of transcription, DNA-dependent    
contig01695 ---NA--- 631 0     0      
contig01696 valyl-trna synthetase 395 20 1.28E-65 79.10% 6 C:cytoplasm; P:valyl-tRNA aminoacylation; F:protein binding; F:ATP binding; F:valine-tRNA ligase activity; P:translational elongation EC:6.1.1.9  
contig01697 ---NA--- 460 0     0      
contig01698 serologically defined colon cancer antigen 10 149 20 9.37E-08 82.35% 1 F:peptidyl-prolyl cis-trans isomerase activity EC:5.2.1.8  
contig01699 serologically defined colon cancer antigen 10 141 20 3.11E-16 90.40% 4 P:protein folding; C:cytoplasm; F:peptidyl-prolyl cis-trans isomerase activity; C:nucleus EC:5.2.1.8  
contig01700 ---NA--- 361 0     0      
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