Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 1301 - 1400:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig01301 utp11- u3 small nucleolar ribonucleoprotein 1068 20 1.40E-62 82.05% 8 C:small-subunit processome; P:induction of apoptosis; P:rRNA processing; C:extracellular space; P:nerve growth factor receptor signaling pathway; P:nervous system development; F:protein binding; C:cytoplasm    
contig01302 14-3-3 zeta 1871 20 1.16E-98 88.90% 16 P:Ras protein signal transduction; P:compound eye photoreceptor cell differentiation; P:oocyte microtubule cytoskeleton polarization; P:olfactory learning; P:cell proliferation; C:cytoplasm; C:germline ring canal; F:monooxygenase activity; F:protein domain specific binding; P:chromosome segregation; ; P:mitotic cell cycle, embryonic; F:tryptophan hydroxylase activator activity; C:nucleus; P:activation of tryptophan 5-monooxygenase activity; P:germarium-derived oocyte fate determination    
contig01303 ---NA--- 471 0     0      
contig01304 ring finger protein 40 304 20 9.71E-34 92.90% 9 F:ligase activity; P:chromatin modification; F:protein binding; P:zinc ion transport; P:ubiquitin-dependent protein catabolic process; P:ubiquitin cycle; C:chromosome; C:nucleus; F:zinc ion binding    
contig01305 impact homolog 444 20 2.69E-15 92.60% 2 P:regulation of translational initiation; P:negative regulation of protein amino acid phosphorylation    
contig01306 ---NA--- 502 0     0      
contig01307 nadh dehydrogenase 1 alpha 39kda 834 20 1.05E-122 87.35% 9 F:protein binding; C:mitochondrial matrix; P:electron transport; P:transport; P:ubiquinone biosynthetic process; C:mitochondrial respiratory chain complex I; P:response to hypoxia; F:coenzyme binding; F:NADH dehydrogenase activity EC:1.6.99.3  
contig01308 novel protein 985 1 1.58E-09 67.00% 0      
contig01309 mucolipin 2 269 20 1.73E-30 92.30% 3 C:integral to membrane; F:cation channel activity; P:ion transport    
contig01310 hect domain containing 3 929 20 6.23E-123 89.85% 6 P:regulation of mitotic metaphase/anaphase transition; F:protein binding; P:cell adhesion; P:ubiquitin cycle; F:ubiquitin-protein ligase activity; C:anaphase-promoting complex EC:6.3.2.19  
contig01311 ---NA--- 258 0     0      
contig01312 ---NA--- 334 0     0      
contig01313 ---NA--- 167 0     0      
contig01314 psmd1 protein 488 20 1.04E-67 99.85% 3 F:protein binding; C:cytosol; C:protein complex    
contig01315 ---NA--- 496 0     0      
contig01316 nadh dehydrogenase 1 beta 18kda 595 20 1.63E-52 84.75% 5 P:mitochondrial electron transport, NADH to ubiquinone; F:NADH dehydrogenase (ubiquinone) activity; P:electron transport; P:transport; C:mitochondrial respiratory chain complex I EC:1.6.5.3  
contig01317 ---NA--- 787 0     0      
contig01318 methyltransferase like 14 1022 20 9.21E-117 95.80% 3 P:nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; C:nucleus; F:methyltransferase activity EC:2.1.1.0  
contig01319 subfamily member 21 459 20 2.82E-09 56.30% 6 F:nucleic acid binding; F:metal ion binding; P:zinc ion transport; F:zinc ion binding; F:heat shock protein binding; C:intracellular    
contig01320 ---NA--- 288 0     0      
contig01321 protein arginine methyltransferase 3 520 20 1.53E-33 80.75% 7 C:cytoplasm; P:protein amino acid methylation; F:nucleic acid binding; F:protein methyltransferase activity; F:protein-arginine N-methyltransferase activity; C:ribonucleoprotein complex; F:zinc ion binding    
contig01322 solute carrier family 29 (nucleoside transporters) member 1 260 13 2.89E-09 85.62% 2 C:membrane; F:nucleoside transmembrane transporter activity    
contig01323 u3 small nucleolar ribonucleoprotein protein imp3 302 20 1.41E-32 89.95% 5 C:nucleolus; F:protein binding; P:rRNA processing; C:ribonucleoprotein complex; F:rRNA binding    
contig01324 kda mitochondrial proteolipid 384 8 3.35E-18 69.25% 1 C:mitochondrion    
contig01325 ---NA--- 274 0     0      
contig01326 ---NA--- 358 0     0      
contig01327 senp3b protein 322 3 1.13E-05 64.33% 1 F:cysteine-type peptidase activity    
contig01328 ocia domain containing 1 293 20 6.01E-15 71.00% 4 F:F; P:P; C:endosome; C:C    
contig01329 ---NA--- 257 0     0      
contig01330 ---NA--- 645 0     0      
contig01331 ---NA--- 1160 0     0      
contig01332 ---NA--- 385 0     0      
contig01333 ---NA--- 383 0     0      
contig01334 ---NA--- 898 0     0      
contig01335 predicted protein [Nematostella vectensis] 570 1 7.15E-07 63.00% 0      
contig01336 ---NA--- 687 0     0      
contig01337 ---NA--- 200 0     0      
contig01338 ---NA--- 169 0     0      
contig01339 ---NA--- 248 0     0      
contig01340 mapkbp1 protein 1371 15 6.95E-07 56.07% 0      
contig01341 ---NA--- 401 0     0      
contig01342 zinc finger protein 615 1507 19 7.85E-47 57.74% 1 F:binding    
contig01343 ---NA--- 512 0     0      
contig01344 ---NA--- 300 0     0      
contig01345 ---NA--- 485 0     0      
contig01346 ---NA--- 912 0     0      
contig01347 ---NA--- 351 0     0      
contig01348 synovial x breakpoint 2 interacting protein 526 20 1.18E-73 80.15% 5 C:protein complex; P:cell adhesion; C:cell junction; C:nucleus; F:protein binding    
contig01349 iq motif containing gtpase activating protein 2 500 20 7.53E-61 81.20% 7 P:regulation of small GTPase mediated signal transduction; F:sequence-specific DNA binding; F:protein dimerization activity; F:transcription factor activity; C:nucleus; F:Ras GTPase activator activity; P:regulation of transcription, DNA-dependent    
contig01350 ---NA--- 524 0     0      
contig01351 5 - cytosolic ia 778 20 1.18E-53 49.95% 8 F:5'-nucleotidase activity; P:nucleotide metabolic process; P:nucleoside metabolic process; C:cytoplasm; F:magnesium ion binding; F:hydrolase activity; F:nucleotide binding; C:cytosol    
contig01352 ---NA--- 378 0     0      
contig01353 peroxisomal membrane protein 4 398 20 9.52E-45 87.80% 3 C:membrane fraction; C:integral to membrane; C:peroxisomal membrane    
contig01354 m-phase phosphoprotein 10 (u3 small nucleolar ribonucleoprotein) 276 20 1.36E-11 91.05% 5 P:RNA splicing; C:small nucleolar ribonucleoprotein complex; ; F:protein binding; P:rRNA processing    
contig01355 PREDICTED: hypothetical protein [Danio rerio] 760 1 1.95E-05 52.00% 0      
contig01356 ---NA--- 278 0     0      
contig01357 ---NA--- 829 0     0      
contig01358 zinc finger protein 143 333 20 2.90E-54 70.60% 7 F:specific RNA polymerase II transcription factor activity; F:metal ion binding; F:RNA polymerase III transcription factor activity; P:regulation of transcription from RNA polymerase II promoter; F:nucleic acid binding; C:intracellular; P:regulation of transcription from RNA polymerase III promoter    
contig01359   206              
contig01360 zinc finger protein 143 395 20 1.56E-71 86.45% 7 F:specific RNA polymerase II transcription factor activity; F:RNA polymerase III transcription factor activity; P:regulation of transcription from RNA polymerase II promoter; F:DNA binding; C:nucleus; F:zinc ion binding; P:regulation of transcription from RNA polymerase III promoter    
contig01361 mitochondrial atp synthase gamma chain 1088 20 1.89E-139 91.15% 6 C:proton-transporting ATP synthase complex, catalytic core F(1); F:hydrogen ion transporting ATP synthase activity, rotational mechanism; C:mitochondrial inner membrane; P:ATP synthesis coupled proton transport; F:metal ion binding; F:proton-transporting ATPase activity, rotational mechanism EC:3.6.3.14  
contig01362 hypothetical trna rrna methyltransferase slr1673 287 3 2.30E-06 68.67% 0      
contig01363 ---NA--- 449 0     0      
contig01364 ---NA--- 233 0     0      
contig01365 daz interacting protein zinc finger 325 20 2.12E-12 71.60% 6 C:cytoplasm; F:metal ion binding; F:polyubiquitin binding; F:RNA binding; P:protein polyubiquitination; F:ubiquitin-protein ligase activity EC:6.3.2.19  
contig01366 formin binding protein 3 310 20 1.44E-37 96.20% 4 P:RNA splicing; F:protein binding; C:nuclear speck; P:mRNA processing    
contig01367 grp1 (general receptor for phosphoinositides 1)-associated scaffold protein 276 20 7.65E-39 79.10% 9 C:cytoplasm; F:receptor activity; C:nuclear envelope lumen; C:postsynaptic membrane; ; C:cell junction; P:intracellular protein transport; F:ADP-ribosylation factor binding; F:PDZ domain binding    
contig01368 aldehyde dehydrogenase 3 member b1 1113 20 1.51E-123 75.00% 2 P:metabolic process; F:oxidoreductase activity    
contig01369 aldehyde dehydrogenase 3 member b1 486 20 3.74E-33 69.35% 2 P:metabolic process; F:oxidoreductase activity    
contig01370 electron-transfer- beta polypeptide 1541 20 2.01E-94 89.20% 4 C:mitochondrial electron transfer flavoprotein complex; F:electron carrier activity; P:electron transport; P:protein targeting    
contig01371 ---NA--- 261 0     0      
contig01372 ---NA--- 729 0     0      
contig01373 ---NA--- 154 0     0      
contig01374 ran binding protein 3 924 20 2.24E-71 93.75% 5 F:Ran GTPase binding; P:protein transport; P:intracellular transport; C:cytoplasm; C:nucleus    
contig01375 origin recognition subunit 4-like 397 20 1.09E-24 88.90% 6 P:DNA replication initiation; F:DNA replication origin binding; F:protein binding; F:ATP binding; F:nucleoside-triphosphatase activity; C:nucleus EC:3.6.1.15  
contig01376 ---NA--- 527 0     0      
contig01377 cdgsh iron sulfur domain 3 1185 20 3.66E-30 66.65% 0      
contig01378 ---NA--- 268 0     0      
contig01379 ubiquitin-conjugating enzyme e2l 3 851 20 4.62E-65 92.10% 6 P:ubiquitin-dependent protein catabolic process; P:ubiquitin cycle; F:ubiquitin-protein ligase activity; F:enzyme binding; P:regulation of protein metabolic process; C:ubiquitin ligase complex EC:6.3.2.19  
contig01380 ---NA--- 287 0     0      
contig01381 membrane-associated ring finger 3 941 20 4.37E-14 93.30% 10 C:early endosome membrane; C:cytoplasmic vesicle membrane; C:lysosomal membrane; F:zinc ion binding; C:integral to membrane; F:ligase activity; F:protein binding; P:ubiquitin cycle; P:endocytosis; C:endoplasmic reticulum membrane    
contig01382 coiled-coil-helix-coiled-coil-helix domain containing 4 743 20 1.77E-56 93.90% 2 P:intracellular protein transmembrane transport; C:mitochondrial intermembrane space    
contig01383 rac gtpase activating protein 1 344 20 1.48E-37 71.35% 12 P:cytokinesis, initiation of separation; P:cytokinesis, actomyosin contractile ring assembly; P:sulfate transport; F:protein C-terminus binding; F:gamma-tubulin binding; P:spermatogenesis; F:alpha-tubulin binding; P:embryonic development; P:neuroblast proliferation; F:beta-tubulin binding; F:GTPase activator activity; C:nucleus    
contig01384 ---NA--- 552 0     0      
contig01385 ---NA--- 279 0     0      
contig01386 endopeptidase type m3 498 20 1.16E-61 80.95% 6 C:mitochondrial intermembrane space; F:metalloendopeptidase activity; F:mitochondrial inner membrane peptidase activity; P:proteolysis; C:cytosol; F:zinc ion binding EC:3.4.24.0  
contig01387 unnamed protein product [Tetraodon nigroviridis] 387 1 7.99E-04 98.00% 0      
contig01388 ---NA--- 253 0     0      
contig01389 cell death regulator aven 258 7 7.62E-10 83.86% 2 F:F; C:C    
contig01390 ---NA--- 249 0     0      
contig01391 far upstream element binding protein 1 541 20 3.10E-59 60.65% 6 F:RNA binding; P:transcription; P:P; C:nucleus; F:DNA binding; C:C    
contig01392 PREDICTED: wu:fq17c05 [Danio rerio] 425 1 1.29E-17 90.00% 0      
contig01393 mannosyl (alpha- -)-glycoprotein beta- -n-acetylglucosaminyltransferase 337 20 3.09E-52 90.35% 4 C:Golgi membrane; F:alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity; P:protein amino acid N-linked glycosylation; C:integral to membrane EC:2.4.1.101  
contig01394 ubiquinol-cytochrome c reductase core protein ii 1731 20 0 82.30% 8 P:aerobic respiration; F:metalloendopeptidase activity; F:protein binding; P:oxidative phosphorylation; P:transport; P:proteolysis; F:zinc ion binding; C:mitochondrial respiratory chain EC:3.4.24.0  
contig01395 taf11 rna polymerase tata box binding protein -associated 28kda 1059 20 1.01E-81 80.50% 5 F:general RNA polymerase II transcription factor activity; F:DNA binding; F:protein binding; C:transcription factor TFIID complex; P:regulation of transcription, DNA-dependent    
contig01396 mitochondrial ribosomal protein l2 296 20 5.08E-06 93.30% 8 F:structural constituent of ribosome; C:mitochondrion; P:translation; C:mitochondrial large ribosomal subunit; C:extracellular space; C:ribonucleoprotein complex; C:ribosome; C:intracellular    
contig01397 ---NA--- 507 0     0      
contig01398 ---NA--- 462 0     0      
contig01399 ---NA--- 527 0     0      
contig01400 solute carrier family 25 (mitochondrial aralar) member 12 693 20 3.00E-60 87.10% 11 P:malate-aspartate shuttle; F:calcium ion binding; C:mitochondrial inner membrane; P:aspartate transport; P:cellular respiration; P:L-glutamate transport; P:ATP biosynthetic process; C:membrane attack complex; F:L-aspartate transmembrane transporter activity; F:L-glutamate transmembrane transporter activity; P:response to calcium ion    
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