Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 1101 - 1200:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig01101 ribosomal protein s3 867 20 1.40E-133 97.55% 5 F:structural constituent of ribosome; F:RNA binding; F:protein binding; C:cytosolic small ribosomal subunit; P:translation EC:3.6.5.3  
contig01102 mediator complex subunit 7 1073 20 2.13E-119 83.10% 6 P:regulation of transcription from RNA polymerase II promoter; P:transcription initiation from RNA polymerase II promoter; C:transcription factor complex; P:transcription antitermination; F:transcription coactivator activity; P:positive regulation of transcription    
contig01103 ---NA--- 1444 0     0      
contig01104 mitochondrial ribosomal protein s6 584 20 5.84E-44 77.80% 4 F:structural constituent of ribosome; C:small ribosomal subunit; P:translation; C:mitochondrion EC:3.6.5.3  
contig01105 ubiquitin specific peptidase 50 616 3 1.84E-09 62.00% 0      
contig01106 histone deacetylase superfamily 713 20 1.60E-36 76.00% 0      
contig01107 bud13 homolog 880 20 1.22E-57 83.35% 0      
contig01108 ---NA--- 280 0     0      
contig01109 acetyl-coenzyme a acetyltransferase 1 1309 20 0 90.25% 4 C:mitochondrial inner membrane; F:acetyl-CoA C-acetyltransferase activity; F:protein binding; P:metabolic process EC:2.3.1.9  
contig01110 ---NA--- 953 0     0      
contig01111 u-box domain containing 5 669 20 5.16E-30 49.95% 1 F:binding    
contig01112 fa83d_danre ame: full=protein fam83d 504 1 1.86E-06 63.00% 2 F:F; C:C    
contig01113 methionyl-trna synthetase 266 20 1.38E-19 93.05% 6 C:cytoplasm; F:protein binding; P:methionyl-tRNA aminoacylation; F:ATP binding; F:methionine-tRNA ligase activity; F:tRNA binding EC:6.1.1.10  
contig01114 ---NA--- 241 0     0      
contig01115 riken cdna 2310037i24 gene 1555 20 0 80.45% 2 F:F; P:P    
contig01116 phosphoribosyl pyrophosphate synthetase-associated protein 1 480 20 2.47E-35 94.75% 8 C:extracellular space; P:nucleotide biosynthetic process; C:protein complex; F:enzyme inhibitor activity; F:ribose phosphate diphosphokinase activity; F:protein binding; F:magnesium ion binding; P:nucleoside metabolic process EC:2.7.6.1  
contig01117 dehydrogenase reductase (sdr family) member 7b 288 20 2.71E-15 80.60% 6 F:binding; F:oxidoreductase activity; C:peroxisomal membrane; C:membrane attack complex; P:metabolic process; P:peroxisome organization    
contig01118 apoptosis inhibitor 5 309 20 7.12E-45 93.60% 4 C:cytoplasm; P:anti-apoptosis; C:nucleus; F:fibroblast growth factor binding    
contig01119 ---NA--- 613 0     0      
contig01120 cytochrome c oxidase subunit mitochondrial precursor 627 20 6.14E-72 88.90% 4 P:electron transport; P:embryonic organ development; P:spinal cord motor neuron differentiation; F:cytochrome-c oxidase activity EC:1.9.3.1  
contig01121 selenoprotein t 1209 20 3.59E-81 90.70% 5 P:selenocysteine incorporation; F:selenium binding; P:cell redox homeostasis; C:signal recognition particle, endoplasmic reticulum targeting; P:negative regulation of signal transduction EC:3.6.5.4  
contig01122 cytochrome c 1386 20 3.24E-44 94.90% 7 F:electron carrier activity; F:iron ion binding; C:mitochondrial matrix; F:heme binding; P:electron transport; P:transport; C:mitochondrial respiratory chain    
contig01123 mitochondrial ribosomal protein s14 588 20 1.29E-54 92.35% 4 C:mitochondrial small ribosomal subunit; C:extracellular space; F:structural constituent of ribosome; P:translation EC:3.6.5.3  
contig01124 ---NA--- 125 0     0      
contig01125 pre-mrna processing factor 8 519 20 7.83E-38 97.40% 7 C:U5 snRNP; P:response to stimulus; ; F:protein binding; C:nuclear speck; P:visual perception; P:nuclear mRNA splicing, via spliceosome    
contig01126 h2a histone member v 905 20 1.83E-54 99.90% 5 C:nucleosome; F:DNA binding; P:nucleosome assembly; P:multicellular organismal development; C:Barr body    
contig01127 ---NA--- 285 0     0      
contig01128 ---NA--- 450 0     0      
contig01129 ---NA--- 527 0     0      
contig01130 voltage-dependent anion channel 2 1843 20 5.21E-152 94.50% 5 P:anion transport; C:mitochondrial inner membrane; F:voltage-gated anion channel activity; C:membrane attack complex; C:mitochondrial outer membrane    
contig01131 ---NA--- 799 0     0      
contig01132 rae1 rna export 1 homolog ( pombe) 265 20 1.33E-22 90.60% 6 C:cytoplasm; C:nuclear pore; C:cytoskeleton; P:mRNA export from nucleus; C:nuclear outer membrane; F:RNA binding    
contig01133 ---NA--- 294 0     0      
contig01134 homeodomain interacting protein kinase 1 242 20 2.92E-38 92.90% 14 P:smoothened signaling pathway; P:positive regulation of DNA binding; F:protein serine/threonine kinase activity; C:nuclear speck; P:DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis; F:DNA binding; P:negative regulation of transcription from RNA polymerase II promoter; F:ATP binding; F:transcription corepressor activity; C:PML body; P:positive regulation of cell proliferation; C:cytoplasm; P:anterior/posterior pattern formation; P:protein amino acid phosphorylation EC:2.7.11.0  
contig01135 pseudouridine synthase homolog 1 1011 20 8.25E-102 83.80% 3 F:RNA binding; P:tRNA pseudouridine synthesis;    
contig01136 ribosomal protein s14 540 20 3.09E-75 98.40% 8 P:translation; F:RNA binding; F:structural constituent of ribosome; C:cytosolic small ribosomal subunit; P:maturation of SSU-rRNA; F:protein binding; P:ribosomal small subunit assembly; P:negative regulation of transcription, DNA-dependent EC:3.6.5.3  
contig01137 transmembrane protein 199 809 20 1.31E-50 87.30% 1 C:integral to membrane    
contig01138 heat shock protein 67b2 752 20 3.11E-40 77.75% 1 P:sulfate transport    
contig01139 abhydrolase domain containing 10 317 20 1.05E-51 85.90% 2 C:mitochondrion; F:serine-type endopeptidase activity EC:3.4.21.0  
contig01140 vacuolar atp synthase 16 kda proteolipid subunit 318 20 1.57E-39 96.10% 9 F:hydrogen ion transporting ATP synthase activity, rotational mechanism; P:ATP synthesis coupled proton transport; F:metal ion binding; C:vacuolar membrane; F:ATP binding; C:membrane attack complex; F:protein binding; F:proton-transporting ATPase activity, rotational mechanism; C:proton-transporting two-sector ATPase complex EC:3.6.3.14  
contig01141 ---NA--- 498 0     0      
contig01142 transmembrane and coiled-coil domain-containing protein 1 865 20 2.86E-70 98.75% 3 C:integral to membrane; C:endoplasmic reticulum membrane; C:Golgi apparatus    
contig01143 dj-1 232 20 8.58E-38 88.40% 6 C:cytoplasm; P:adult locomotory behavior; P:dopamine uptake; F:protein binding; P:response to hydrogen peroxide; C:nucleus    
contig01144 denn madd domain containing 2d 917 20 3.75E-71 72.65% 3 F:F; P:P; C:C    
contig01145 thump domain containing 1 256 20 1.21E-23 74.65% 3 F:F; P:P; C:C    
contig01146 cop9 constitutive photomorphogenic homolog subunit 4 1584 20 1.17E-169 95.60% 3 C:cytoplasm; F:protein binding; C:signalosome    
contig01147 solute carrier family 25 (mitochondrial carrier adenine nucleotide translocator) member 6 1302 20 3.53E-154 95.60% 6 P:apoptosis; F:protein binding; C:membrane attack complex; P:mitochondrial transport; F:ATP:ADP antiporter activity; C:mitochondrial inner membrane presequence translocase complex    
contig01148 elac homolog 2 310 20 1.10E-29 76.20% 3 F:metal ion binding; F:protein binding; F:nuclease activity    
contig01149 cell division cycle 2-like 1 272 20 1.19E-23 87.70% 7 P:apoptosis; P:regulation of mitosis; F:ATP binding; P:blastocyst development; F:cyclin-dependent protein kinase activity; C:nucleus; P:protein amino acid phosphorylation EC:2.7.11.22  
contig01150 poly a binding cytoplasmic 1 b 554 20 5.11E-12 92.20% 5 P:RNA splicing; C:spliceosomal complex; F:poly(A) RNA binding; P:mRNA processing; F:nucleotide binding    
contig01151 zgc:55344 protein 167 1 2.34E-11 80.00% 2 F:F; P:P    
contig01152 ---NA--- 201 0     0      
contig01153 retinoblastoma binding protein like 296 20 1.90E-53 98.70% 2 P:transcription antitermination; P:regulation of transcription, DNA-dependent    
contig01154 ---NA--- 295 0     0      
contig01155 cofilin 2 1069 20 6.10E-42 62.60% 2 C:nucleus; F:protein binding    
contig01156 member ras oncogene family 463 20 3.38E-50 77.15% 7 C:Golgi apparatus; F:ATP binding; F:transcription factor binding; C:membrane; P:small GTPase mediated signal transduction; P:regulation of transcription, DNA-dependent; P:protein transport    
contig01157 ---NA--- 321 0     0      
contig01158 mitochondrial ribosomal protein s22 405 20 4.81E-57 89.85% 3 C:mitochondrial small ribosomal subunit; F:structural constituent of ribosome; F:protein binding    
contig01159 ---NA--- 387 0     0      
contig01160 maternal embryonic leucine zipper kinase 392 20 2.99E-35 58.70% 4 F:protein kinase activity; P:erythrocyte development; P:regulation of heart contraction; F:nucleotide binding    
contig01161 endonuclease iv 484 20 1.12E-77 75.70% 2 F:binding; F:nuclease activity    
contig01162 ---NA--- 326 0     0      
contig01163 g1 to s phase transition 1 177 20 1.26E-17 94.70% 10 P:translation; F:translation release factor activity; P:regulation of transcription, DNA-dependent; F:DNA binding; P:activation of caspase activity; P:protein ubiquitination; F:protein binding; F:GTPase activity; C:nucleus; F:GTP binding EC:3.6.5.3; EC:3.6.5.1; EC:3.6.5.2; EC:3.6.5.4  
contig01164 ---NA--- 113 0     0      
contig01165 g1 to s phase transition 1 255 20 4.02E-43 100.00% 10 P:translation; F:translation release factor activity; P:regulation of transcription, DNA-dependent; F:DNA binding; P:activation of caspase activity; P:protein ubiquitination; F:protein binding; F:GTPase activity; C:nucleus; F:GTP binding EC:3.6.5.3; EC:3.6.5.1; EC:3.6.5.2; EC:3.6.5.4  
contig01166 ---NA--- 354 0     0      
contig01167 ---NA--- 333 0     0      
contig01168 ribosomal rna processing 1 homolog b 1006 20 9.94E-116 66.00% 3 F:protein binding; C:nucleus; C:cytosol    
contig01169 ---NA--- 337 0     0      
contig01170 a chain crystal structure of cyclin-dependent kinase 2 with inhibitor 1133 20 6.00E-35 91.10% 14 C:cyclin-dependent protein kinase holoenzyme complex; P:potassium ion transport; C:transcription factor complex; C:chromosome, telomeric region; P:cell division; C:X chromosome; F:ATP binding; F:protein binding; P:mitosis; C:condensed chromosome; F:cyclin-dependent protein kinase activity; C:Y chromosome; P:protein amino acid phosphorylation; P:positive regulation of transcription EC:2.7.11.22  
contig01171 ---NA--- 243 0     0      
contig01172 nucleoporin 54kda 845 20 1.97E-84 91.10% 8 C:cytoplasm; C:nuclear pore; P:intracellular protein transmembrane transport; C:nucleoplasm; F:protein binding; P:nucleocytoplasmic transport; P:mRNA transport; P:protein targeting    
contig01173 ---NA--- 327 0     0      
contig01174 gametogenetin binding protein 2 746 20 1.34E-11 69.00% 3 C:cytoplasm; C:nucleus; F:protein binding    
contig01175 small nuclear rna activating polypeptide 50kda 245 20 1.07E-32 78.80% 6 P:transcription from RNA polymerase III promoter; F:DNA binding; P:snRNA transcription; C:nucleus; P:transcription from RNA polymerase II promoter; P:regulation of transcription, DNA-dependent    
contig01176 eukaryotic translation initiation factor 2a 499 20 1.81E-59 77.80% 6 C:eukaryotic translation initiation factor 2 complex; F:translation initiation factor activity; P:regulation of translation; P:ribosome assembly; F:ribosome binding; F:tRNA binding    
contig01177 lsm11 protein 476 19 1.60E-36 59.16% 2 P:RNA metabolic process; C:intracellular part    
contig01178 ---NA--- 239 0     0      
contig01179 nadh dehydrogenase ubiquinone flavoprotein 1 precursor 1059 20 0 95.70% 11 F:NAD or NADH binding; P:transport; F:NADH dehydrogenase (ubiquinone) activity; C:mitochondrial respiratory chain complex I; P:ubiquinone biosynthetic process; C:extracellular space; F:4 iron, 4 sulfur cluster binding; P:mitochondrial electron transport, NADH to ubiquinone; F:iron ion binding; F:FMN binding; P:electron transport EC:1.6.5.3  
contig01180 ---NA--- 249 0     0      
contig01181 ---NA--- 785 0     0      
contig01182 ---NA--- 218 0     0      
contig01183 dci protein 747 20 6.49E-98 85.55% 4 C:mitochondrial inner membrane; C:mitochondrial matrix; F:dodecenoyl-CoA delta-isomerase activity; P:fatty acid beta-oxidation EC:5.3.3.8  
contig01184 mgc84124 protein 706 20 4.51E-59 62.70% 3 F:nucleic acid binding; P:P; C:C    
contig01185 dipeptidyl peptidase 9 819 20 9.05E-39 98.40% 4 F:copper ion binding; F:dipeptidyl-peptidase IV activity; C:membrane; F:electron carrier activity EC:3.4.14.5  
contig01186 mitochondrial ribosomal protein s22 593 12 1.33E-06 77.50% 7 F:structural constituent of ribosome; C:mitochondrion; C:mitochondrial small ribosomal subunit; F:F; C:ribonucleoprotein complex; C:ribosome; C:C    
contig01187 nuclear protein hcc-1 1028 20 1.63E-34 76.45% 0      
contig01188 adhesion regulating molecule 1 965 20 5.33E-55 90.75% 9 C:integral to plasma membrane; P:proteasome assembly; C:membrane fraction; P:RNA elongation from RNA polymerase II promoter; P:multicellular organismal development; C:proteasome complex; C:nucleus; C:cytosol; F:proteasome activator activity    
contig01189 ---NA--- 705 0     0      
contig01190 ---NA--- 595 0     0      
contig01191 ---NA--- 263 0     0      
contig01192 bacteriodes thetaiotaomicron symbiotic chitinase 380 7 2.51E-05 51.00% 3 F:metal ion binding; F:zinc ion binding; F:protein binding    
contig01193 ---NA--- 502 0     0      
contig01194 sialic acid acetylesterase 385 20 8.32E-33 67.65% 2 C:extracellular space; F:hydrolase activity    
contig01195 ---NA--- 450 0     0      
contig01196 pseudoautosomal gtp-binding 355 18 6.38E-09 74.33% 3 F:GTP binding; F:nucleotide binding; C:intracellular    
contig01197 rcd1 required for cell differentiation1 homolog 610 20 6.88E-41 93.40% 3 P:cytokine-mediated signaling pathway; P:sex differentiation; F:binding    
contig01198 transcription elongation factor a 2 124 2 1.33E-06 98.50% 11 F:RNA polymerase II transcription factor activity; C:nucleus; F:transcription regulator activity; F:nucleic acid binding; F:zinc ion binding; F:translation elongation factor activity; P:regulation of transcription, DNA-dependent; P:RNA elongation; F:protein binding; P:transcription; P:regulation of transcription    
contig01199 sjchgc07530 protein 412 3 1.19E-23 84.00% 0      
contig01200 general transcription factor polypeptide 74kda 684 20 2.07E-29 86.50% 8 P:transcription initiation from RNA polymerase II promoter; P:regulation of transcription, DNA-dependent; F:general RNA polymerase II transcription factor activity; F:DNA binding; C:transcription factor TFIIF complex; F:transcription coactivator activity; F:catalytic activity; P:positive regulation of transcription    
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