Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 1001 - 1100:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig01001 sphingosine-1-phosphate phosphatase 1 417 20 1.13E-29 73.30% 10 P:apoptosis; C:membrane fraction; C:Golgi apparatus; P:sphinganine-1-phosphate metabolic process; P:sphingosine metabolic process; C:membrane; C:endoplasmic reticulum; C:actin cytoskeleton; C:mitochondrion; F:sphingosine-1-phosphate phosphatase activity    
contig01002 small nuclear ribonucleoprotein d1 polypeptide 16kda 638 20 3.52E-46 96.25% 7 C:cytoplasm; C:small nucleolar ribonucleoprotein complex; ; C:spliceosomal complex; F:protein binding; C:small nuclear ribonucleoprotein complex; P:spliceosome assembly    
contig01003 ---NA--- 405 0     0      
contig01004 ---NA--- 485 0     0      
contig01005 ---NA--- 286 0     0      
contig01006 all-trans- -dihydroretinol saturase 1388 20 1.33E-122 74.25% 11 P:retinol metabolic process; C:signal recognition particle, endoplasmic reticulum targeting; P:negative regulation of signal transduction; C:nuclear outer membrane; P:carotenoid biosynthetic process; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; F:all-trans-retinol 13,14-reductase activity; C:membrane attack complex; F:FAD binding; C:endoplasmic reticulum membrane; P:electron transport EC:3.6.5.4; EC:1.3.99.23  
contig01007 d330012f22rik protein 346 20 2.62E-10 64.85% 2 F:F; C:C    
contig01008 dna p49 subunit 733 20 4.15E-58 71.05% 4 F:protein binding; F:DNA primase activity; C:alpha DNA polymerase:primase complex; P:DNA replication, synthesis of RNA primer    
contig01009 ---NA--- 601 0     0      
contig01010 nucleophosmin 3 1248 20 1.10E-40 82.90% 4 F:binding; P:gene expression; P:RNA metabolic process; C:nucleus    
contig01011 translocase of inner mitochondrial membrane 9 homolog 480 20 9.61E-42 92.35% 9 F:zinc ion binding; P:zinc ion transport; C:mitochondrial inner membrane presequence translocase complex; P:protein import into mitochondrial inner membrane; C:mitochondrial intermembrane space protein transporter complex; C:membrane attack complex; F:protein binding; P:intracellular protein transmembrane transport; P:sensory perception of sound    
contig01012 ---NA--- 247 0     0      
contig01013 vma21 vacuolar h+-atpase homolog ( cerevisiae) 360 20 7.95E-28 84.10% 0      
contig01014 proteasome ( macropain) beta 7 973 20 3.74E-64 93.10% 5 C:proteasome core complex; F:threonine-type endopeptidase activity; P:ubiquitin-dependent protein catabolic process; F:endopeptidase inhibitor activity; C:nucleus EC:3.4.25.0  
contig01015 ---NA--- 416 0     0      
contig01016 ---NA--- 628 0     0      
contig01017 nol1 nop2 sun domain member 5 1593 20 0 76.30% 1 F:transferase activity    
contig01018 transmembrane protein 39b 1168 20 0 89.00% 1 C:membrane attack complex    
contig01019 valyl-trna synthetase 352 20 2.04E-47 74.15% 22 F:valine-tRNA ligase activity; P:transport; F:transcription regulator activity; P:antigen processing and presentation; F:receptor binding; F:nucleic acid binding; F:metal ion binding; P:transcription; F:transferase activity, transferring glycosyl groups; C:protein complex; P:valyl-tRNA aminoacylation; P:signal transduction; P:regulation of cellular process; C:intracellular organelle part; F:receptor activity; F:protein homodimerization activity; C:plasma membrane part; F:transcription factor binding; F:ATP binding; C:nucleus; P:developmental process; C:mitochondrion EC:6.1.1.9  
contig01020 ---NA--- 435 0     0      
contig01021 kinesin family member 20a 612 4 4.79E-10 65.50% 5 F:nucleotide binding; F:microtubule motor activity; C:microtubule associated complex; P:microtubule-based movement; C:microtubule    
contig01022 forty-two-three domain containing 1 1409 20 1.17E-81 54.95% 0      
contig01023 polymerase (dna-directed) delta interacting protein 3 609 20 1.48E-71 89.65% 2 F:nucleotide binding; F:RNA binding    
contig01024 mesenchymal stem cell protein dscd75 588 20 6.48E-22 79.85% 0      
contig01025 ---NA--- 338 0     0      
contig01026 ---NA--- 617 0     0      
contig01027 phenylalanyl-trna alpha subunit 1902 20 0 91.00% 5 C:cytoplasm; C:soluble fraction; F:phenylalanine-tRNA ligase activity; F:ATP binding; P:phenylalanyl-tRNA aminoacylation EC:6.1.1.20  
contig01028 acyl-coenzyme a c-4 to c-12 straight chain 1855 20 0 92.95% 5 C:mitochondrial matrix; P:electron transport; P:fatty acid beta-oxidation; F:acyl-CoA dehydrogenase activity; F:FAD binding EC:1.3.99.3  
contig01029 ---NA--- 1102 0     0      
contig01030 ---NA--- 260 0     0      
contig01031 acyl-coenzyme a binding domain containing 5 493 20 2.57E-26 56.55% 7 F:lipid binding; F:binding; F:acyl-CoA binding; C:integral to membrane; C:membrane; C:membrane attack complex; P:transport    
contig01032 prohibitin 2 932 20 9.84E-67 95.80% 8 F:receptor activity; F:specific transcriptional repressor activity; C:mitochondrial inner membrane; P:signal transduction; C:nucleus; P:negative regulation of transcription; P:regulation of transcription, DNA-dependent; F:estrogen receptor binding    
contig01033 ---NA--- 968 0     0      
contig01034 ---NA--- 363 0     0      
contig01035 rad18 homolog ( cerevisiae) 384 20 3.23E-29 75.55% 7 C:chromatin; F:protein binding; P:zinc ion transport; F:damaged DNA binding; C:nucleus; F:zinc ion binding; P:DNA repair    
contig01036 -related lipid transfer domain containing 7 462 20 8.57E-70 79.55% 0      
contig01037 solute carrier family member 26 349 20 1.05E-43 80.25% 5 P:S-adenosylmethionine transport; F:binding; C:mitochondrial inner membrane; F:S-adenosylmethionine transmembrane transporter activity; C:membrane attack complex    
contig01038 unnamed protein product [Tetraodon nigroviridis] 877 5 2.13E-28 59.40% 0      
contig01039 subfamily member 9 1175 20 5.46E-95 77.80% 2 P:protein folding; F:heat shock protein binding    
contig01040 importin 9 795 20 1.02E-47 85.50% 6 F:protein transporter activity; F:Ran GTPase binding; F:histone binding; C:nuclear pore; C:cytoplasm; P:protein import into nucleus, docking    
contig01041 ---NA--- 279 0     0      
contig01042 ---NA--- 834 0     0      
contig01043 mediator complex subunit 24 isoform 2 1157 20 7.63E-126 86.35% 6 P:thymus development; P:retinal cone cell development; P:regulation of transcription, DNA-dependent; P:nervous system development; P:transcription antitermination; C:nucleus    
contig01044 nadh dehydrogenase 1 subunit mitochondrial precursor 379 20 1.42E-24 69.50% 2 C:mitochondrial inner membrane; C:integral to membrane    
contig01045 yth domain member 2 503 20 8.00E-50 59.10% 1 P:humoral immune response    
contig01046 zinc finger protein 183 1082 20 1.64E-151 85.55% 6 P:multicellular organismal development; P:zinc ion transport; C:nucleus; F:DNA binding; F:zinc ion binding; F:protein binding    
contig01047 multiple myeloma tumor-associated protein 2 homolog 1590 20 1.47E-67 80.80% 2 F:F; P:P    
contig01048 ecto-adp-ribosyltransferase 5 precursor 1222 20 7.17E-61 56.45% 0      
contig01049 general transcription factor 12kda 317 20 9.26E-40 98.30% 7 F:identical protein binding; C:transcription factor TFIIA complex; F:RNA polymerase II transcription factor activity; P:transcription initiation from RNA polymerase II promoter; F:translation initiation factor activity; F:transcription factor activity; P:regulation of transcription, DNA-dependent    
contig01050 ---NA--- 451 0     0      
contig01051 low-density lipoprotein receptor-related protein 4 precursor (multiple epidermal growth factor-like domains 7) 3198 20 0 46.05% 0      
contig01052 ---NA--- 180 0     0      
contig01053 adrenocortical alacrimia ( triple-a) 511 20 1.41E-81 73.55% 4 C:nuclear pore; P:learning; P:regulation of nucleocytoplasmic transport; P:fertilization    
contig01054 ribose 5-phosphate isomerase a (ribose 5-phosphate epimerase) 301 19 2.42E-08 91.84% 2 P:pentose-phosphate shunt, non-oxidative branch; F:isomerase activity    
contig01055 ---NA--- 259 0     0      
contig01056 mgc82375 protein 293 9 2.70E-15 82.00% 2 P:metabolic process; F:methyltransferase activity EC:2.1.1.0  
contig01057 bccip homolog 541 20 6.65E-78 87.05% 3 P:cell cycle; P:DNA repair; C:nucleus    
contig01058 mgc107918 protein 246 20 3.21E-37 95.80% 2 F:F; C:C    
contig01059 ---NA--- 736 0     0      
contig01060 cardiolipin synthase 1 690 20 4.41E-19 83.95% 4 F:CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; P:phospholipid biosynthetic process; C:integral to membrane; C:mitochondrion EC:2.7.8.5  
contig01061 ---NA--- 251 0     0      
contig01062 zona pellucida glycoprotein 4 1727 20 4.46E-166 46.70% 8 P:single fertilization; F:receptor activity; C:integral to membrane; C:membrane; F:acrosin binding; C:proteinaceous extracellular matrix; C:extracellular region; C:plasma membrane    
contig01063 transmembrane protein 48 247 8 7.41E-26 72.50% 3 C:membrane attack complex; P:intracellular protein transmembrane transport; C:nucleus    
contig01064 ---NA--- 602 0     0      
contig01065 ---NA--- 763 0     0      
contig01066 tuberous sclerosis 2 656 20 3.84E-51 72.20% 35 P:regulation of endocytosis; P:regulation of focal adhesion assembly; P:negative regulation of phosphoinositide 3-kinase cascade; P:protein heterooligomerization; C:neuron projection; F:receptor binding; P:regulation of stress fiber assembly; P:insulin-like growth factor receptor signaling pathway; P:negative regulation of TOR signaling pathway; C:growth cone; C:cytoskeletal part; P:regulation of small GTPase mediated signal transduction; P:positive chemotaxis; P:heart development; C:microsome; P:negative regulation of MAP kinase activity; C:Golgi apparatus; F:protein heterodimerization activity; P:acute-phase response; C:TSC1-TSC2 complex; P:negative regulation of Wnt receptor signaling pathway; P:regulation of insulin receptor signaling pathway; P:regulation of cell cycle; P:negative regulation of cell size; P:negative regulation of epithelial cell proliferation; C:perinuclear region of cytoplasm; P:positive regulation of GTPase activity; F:protein homodimerization activity; P:protein homooligomerization; C:caveola; F:Rab GTPase activator activity; P:protein import into nucleus; C:nucleus; P:cell projection organization; P:negative regulation of protein kinase B signaling cascade    
contig01067 unnamed protein product [Tetraodon nigroviridis] 258 1 3.19E-16 76.00% 0      
contig01068 rae1 rna export 1 homolog ( pombe) 299 20 1.84E-39 96.20% 7 C:cytoplasm; C:nuclear pore; C:cytoskeleton; F:microtubule binding; P:mRNA export from nucleus; C:nuclear outer membrane; F:RNA binding    
contig01069 rae1 rna export 1 homolog ( pombe) 168 20 6.34E-17 97.00% 6 C:cytoplasm; C:nuclear pore; C:cytoskeleton; P:mRNA export from nucleus; C:nuclear outer membrane; F:RNA binding    
contig01070 mannosyl (alpha- -)-glycoprotein beta- -n-acetylglucosaminyltransferase 406 20 1.90E-37 74.65% 6 F:alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity; F:sugar binding; C:Golgi stack; P:oligosaccharide biosynthetic process; C:integral to membrane; P:protein amino acid N-linked glycosylation via asparagine EC:2.4.1.143  
contig01071 f-box protein 5 1325 20 3.96E-76 51.75% 5 P:mitotic cell cycle; C:intracellular organelle; F:binding; P:cell cycle process; P:biological regulation    
contig01072 ---NA--- 589 0     0      
contig01073 rwd domain containing 1 284 20 1.54E-15 95.05% 1 F:protein binding    
contig01074 ---NA--- 591 0     0      
contig01075 rna binding protein serine-rich domain 877 20 5.21E-43 94.15% 10 C:cytoplasm; P:RNA splicing; F:DNA binding; F:RNA binding; F:protein binding; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; P:transcription; C:nuclear speck; P:mRNA processing; F:nucleotide binding    
contig01076 ---NA--- 103 0     0      
contig01077 unnamed protein product [Tetraodon nigroviridis] 171 1 3.59E-04 76.00% 0      
contig01078 low-density lipoprotein 145 5 7.69E-10 67.20% 0      
contig01079 coiled-coil domain containing 6 348 20 1.86E-32 81.55% 4 C:intracellular part; F:protein binding; F:protein tyrosine kinase activity; F:structural constituent of cytoskeleton EC:2.7.10.0  
contig01080 large subunit gtpase 1 homolog ( cerevisiae) 540 20 8.72E-62 89.30% 5 P:protein transport; C:endoplasmic reticulum; F:hydrolase activity; C:nucleus; F:GTP binding    
contig01081 ---NA--- 581 0     0      
contig01082 gap junction beta 6 226 20 3.40E-34 82.60% 3 C:membrane attack complex; P:cell communication; C:connexon complex    
contig01083 ---NA--- 260 0     0      
contig01084 fast kinase domains 1 346 20 2.61E-18 75.00% 3 P:apoptosis; F:ATP binding; F:protein kinase activity    
contig01085 retinoblastoma binding protein 4 265 20 5.54E-45 96.20% 8 P:cell cycle; P:regulation of transcription, DNA-dependent; P:DNA replication; P:negative regulation of cell proliferation; C:NuRD complex; F:protein binding; F:DNA-dependent ATPase activity; P:chromatin remodeling    
contig01086 ---NA--- 446 0     0      
contig01087 growth differentiation factor 9 1092 20 3.85E-140 53.30% 4 F:growth factor activity; F:cytokine activity; C:extracellular space; C:extracellular region    
contig01088 proteasome ( macropain) alpha 6 902 20 9.40E-136 97.30% 7 C:proteasome core complex; F:RNA binding; F:protein binding; F:threonine-type endopeptidase activity; P:ubiquitin-dependent protein catabolic process; F:endopeptidase inhibitor activity; C:nucleus EC:3.4.25.0  
contig01089 ---NA--- 414 0     0      
contig01090 short-chain dehydrogenase reductase 297 20 2.04E-23 91.35% 5 C:extracellular region; P:metabolic process; F:oxidoreductase activity; F:binding; F:cysteine-type endopeptidase activity EC:3.4.22.0  
contig01091 pif1 rrm3 dna helicase-like protein 1210 20 0 85.85% 8 F:telomeric DNA binding; F:ATP binding; F:single-stranded DNA-dependent ATP-dependent DNA helicase activity; F:ATP-dependent 5'-3' DNA helicase activity; F:magnesium ion binding; C:nuclear chromosome, telomeric region; P:regulation of telomere maintenance; P:negative regulation of telomerase activity    
contig01092 pif1 5 -to-3 dna helicase homolog 457 7 6.97E-16 83.57% 5 F:nucleoside-triphosphatase activity; F:ATP binding; F:helicase activity; C:nucleus; F:DNA binding EC:3.6.1.15  
contig01093 methylmalonic aciduria (cobalamin deficiency) cbld with homocystinuria 657 20 6.17E-65 87.05% 1 C:mitochondrion    
contig01094 ---NA--- 769 0     0      
contig01095 ---NA--- 381 0     0      
contig01096 coiled-coil domain containing 6 687 20 1.00E-31 83.85% 4 C:cytoskeleton; C:cytoplasm; F:protein binding; F:structural constituent of cytoskeleton    
contig01097 ---NA--- 359 0     0      
contig01098 cell division cycle associated 7 1034 20 5.33E-80 64.80% 5 P:regulation of transcription, DNA-dependent; P:transcription; P:cell division; P:P; C:C    
contig01099 ---NA--- 397 0     0      
contig01100 ---NA--- 717 0     0      
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