Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 10601 - 10700:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig10601 upf0466 protein mitochondrial 292 20 3.41E-18 85.95% 3 C:integral to membrane; C:extracellular space; C:mitochondrion    
contig10602 ---NA--- 309 0     0      
contig10603 ---NA--- 111 0     0      
contig10604 ---NA--- 627 0     0      
contig10605 PREDICTED: wu:fb54e10 [Danio rerio] 252 1 5.69E-05 77.00% 0      
contig10606 ---NA--- 240 0     0      
contig10607 tho complex 4 1362 20 2.36E-47 67.35% 4 F:RNA binding; F:protein binding; F:single-stranded DNA binding; C:nucleus    
contig10608 ---NA--- 256 0     0      
contig10609 ubiquitin-conjugating enzyme e2-25k 425 20 2.60E-18 95.10% 6 C:cytoplasm; F:protein binding; P:ubiquitin-dependent protein catabolic process; P:ubiquitin cycle; F:ubiquitin-protein ligase activity; P:regulation of protein metabolic process EC:6.3.2.19  
contig10610 flap structure-specific endonuclease 1 622 20 8.10E-61 86.95% 16 F:5'-3' exonuclease activity; F:damaged DNA binding; F:double-stranded DNA binding; F:manganese ion binding; P:double-strand break repair; P:base-excision repair; P:DNA replication; P:UV protection; F:5'-flap endonuclease activity; F:double-stranded DNA specific exodeoxyribonuclease activity; F:protein binding; F:magnesium ion binding; F:ribonuclease H activity; P:retina development in camera-type eye; P:phosphoinositide-mediated signaling; C:nucleus EC:3.1.26.4  
contig10611 ---NA--- 362 0     0      
contig10612 ataxin 7-like 3 560 20 7.09E-41 90.30% 3 F:F; P:P; C:C    
contig10613 ---NA--- 442 0     0      
contig10614 heavy polypeptide non-muscle 207 20 1.27E-17 84.20% 40 P:angiogenesis; C:cortical cytoskeleton; P:regulation of cell shape; C:neuromuscular junction; P:actin filament-based movement; F:actin-dependent ATPase activity; P:establishment of meiotic spindle localization; C:cell-cell adherens junction; P:cell-cell adhesion; F:ADP binding; P:protein transport; C:immunological synapse; C:cytosol; P:myoblast fusion; F:microfilament motor activity; P:membrane protein ectodomain proteolysis; P:blood vessel endothelial cell migration; C:integrin complex; C:spindle; C:ruffle; P:meiotic metaphase I; C:cleavage furrow; P:meiotic spindle organization; P:establishment of T cell polarity; F:protein anchor; F:actin filament binding; C:stress fiber; C:uropod; P:cell morphogenesis involved in differentiation; F:protein homodimerization activity; P:actin cytoskeleton reorganization; P:platelet formation; P:monocyte differentiation; F:calmodulin binding; C:nucleus; F:ATP binding; C:actomyosin contractile ring; P:in utero embryonic development; C:myosin complex; P:cytokinesis    
contig10615 fungal metazoan origin like protein variant 2 397 20 2.20E-33 86.70% 1 C:integral to membrane    
contig10616 cytochrome c oxidase polypeptide viii- mitochondrial precursor 346 18 1.10E-08 59.78% 6 C:mitochondrion; F:cytochrome-c oxidase activity; C:integral to membrane; C:membrane; P:electron transport; C:mitochondrial inner membrane    
contig10617 ---NA--- 162 0     0      
contig10618 expressed sequence isoform cra_a 923 20 9.11E-49 84.45% 2 F:F; C:C    
contig10619 ---NA--- 363 0     0      
contig10620 ---NA--- 241 0     0      
contig10621 ---NA--- 621 0     0      
contig10622 ---NA--- 233 0     0      
contig10623 ---NA--- 282 0     0      
contig10624 ---NA--- 156 0     0      
contig10625 dihydrolipoamide dehydrogenase 486 20 1.37E-43 96.35% 18 F:NAD or NADH binding; P:gastrulation; F:lipoamide binding; P:cell redox homeostasis; P:dihydrolipoamide metabolic process; P:sperm capacitation; P:proteolysis; P:acetyl-CoA biosynthetic process from pyruvate; C:pyruvate dehydrogenase complex; P:mitochondrial electron transport, NADH to ubiquinone; C:acrosomal matrix; C:flagellum; C:mitochondrial matrix; F:dihydrolipoyl dehydrogenase activity; P:regulation of membrane potential; F:FAD binding; P:lipoate metabolic process; P:electron transport EC:1.8.1.4  
contig10626 ---NA--- 239 0     0      
contig10627 ---NA--- 337 0     0      
contig10628 ---NA--- 1476 0     0      
contig10629 ---NA--- 243 0     0      
contig10630 ---NA--- 430 0     0      
contig10631 ---NA--- 284 0     0      
contig10632 mus81 endonuclease homolog 547 20 1.01E-36 87.65% 7 F:endonuclease activity; F:sequence-specific DNA binding; F:protein binding; F:magnesium ion binding; C:nucleus; P:DNA recombination; P:DNA repair    
contig10633 ---NA--- 548 0     0      
contig10634 novel protein 1420 20 9.70E-68 50.75% 4 C:cytoplasm; P:P; F:DNA binding; C:nucleus    
contig10635 ---NA--- 217 0     0      
contig10636 ---NA--- 403 0     0      
contig10637 splicing factor 3b subunit 5 736 20 3.68E-46 95.90% 3 P:mRNA processing; C:spliceosomal complex; P:RNA splicing    
contig10638 ---NA--- 278 0     0      
contig10639 member ras oncogene family 1064 20 1.10E-59 63.20% 6 F:GTP binding; P:small GTPase mediated signal transduction; F:nucleotide binding; P:protein transport; P:transport; C:intracellular    
contig10640 ---NA--- 249 0     0      
contig10641 ---NA--- 266 0     0      
contig10642 small nuclear ribonucleoprotein sm d2 778 20 1.11E-51 98.35% 6 C:small nucleolar ribonucleoprotein complex; ; C:spliceosomal complex; F:protein binding; C:small nuclear ribonucleoprotein complex; P:spliceosome assembly    
contig10643 ---NA--- 452 0     0      
contig10644 gametocyte specific factor 1 956 20 5.98E-67 65.00% 0      
contig10645 disabled homolog 2 475 1 4.55E-07 68.00% 0      
contig10646 mitochondrial ribosomal protein l27 802 20 4.89E-58 83.60% 3 C:mitochondrial large ribosomal subunit; F:structural constituent of ribosome; P:translation EC:3.6.5.3  
contig10647 ankyrin repeat domain 16 286 20 3.10E-27 76.00% 2 F:F; C:C    
contig10648 ---NA--- 269 0     0      
contig10649 ankyrin repeat domain 54 452 20 1.04E-43 85.80% 2 F:DNA binding; P:regulation of transcription, DNA-dependent    
contig10650 ---NA--- 298 0     0      
contig10651 ---NA--- 260 0     0      
contig10652 ribosomal protein s29 286 20 1.26E-28 98.30% 8 P:regulation of cell shape; P:ribosome biogenesis; F:structural constituent of ribosome; F:RNA binding; F:protein binding; C:cytosolic small ribosomal subunit; F:zinc ion binding; P:translation EC:3.6.5.3  
contig10653 ---NA--- 202 0     0      
contig10654 nudix (nucleoside diphosphate linked moiety x)-type motif 1 571 20 1.13E-28 82.20% 4 C:extracellular space; P:dGTP catabolic process; F:8-oxo-7,8-dihydroguanine triphosphatase activity; P:DNA repair    
contig10655 ---NA--- 239 0     0      
contig10656 coiled-coil domain containing 36 1356 1 2.29E-10 48.00% 0      
contig10657 ---NA--- 250 0     0      
contig10658 ribosomal protein s13 532 20 9.17E-37 98.40% 5 F:structural constituent of ribosome; F:RNA binding; F:protein binding; C:cytosolic small ribosomal subunit; P:translation EC:3.6.5.3  
contig10659 40s ribosomal protein s11 573 20 1.70E-80 96.85% 5 F:structural constituent of ribosome; F:protein binding; C:cytosolic small ribosomal subunit; P:translation; F:rRNA binding EC:3.6.5.3  
contig10660 glioma tumor suppressor candidate region gene 2 1538 20 6.61E-134 67.00% 1 C:intracellular    
contig10661 ---NA--- 263 0     0      
contig10662 ---NA--- 376 0     0      
contig10663 zgc:175135 protein 636 14 1.14E-28 55.57% 6 F:F; C:nucleosome; P:P; P:nucleosome assembly; C:nucleus; C:C    
contig10664 gamma-aminobutyric acid receptor-associated protein 1390 20 3.70E-64 97.50% 10 F:receptor activity; F:microtubule binding; C:microtubule associated complex; C:Golgi apparatus; C:plasma membrane; C:lysosome; P:microtubule cytoskeleton organization; C:actin cytoskeleton; P:protein transport; C:microtubule    
contig10665 complement component q subcomponent binding protein 1629 20 3.34E-123 83.75% 3 F:protein binding; C:mitochondrial matrix; P:immune response    
contig10666 carboxypeptidase z 497 20 5.13E-38 68.95% 5 F:metal ion binding; F:metallocarboxypeptidase activity; P:protein processing; P:proteolysis; C:proteinaceous extracellular matrix EC:3.4.17.0  
contig10667 ---NA--- 235 0     0      
contig10668 ---NA--- 238 0     0      
contig10669 ---NA--- 284 0     0      
contig10670 ---NA--- 337 0     0      
contig10671 ---NA--- 267 0     0      
contig10672 ---NA--- 1137 0     0      
contig10673 ---NA--- 933 0     0      
contig10674 ---NA--- 305 0     0      
contig10675 ---NA--- 245 0     0      
contig10676 nadh dehydrogenase ubiquinone fe-s 8 834 20 3.44E-49 98.85% 11 P:response to oxidative stress; F:NADH dehydrogenase (ubiquinone) activity; C:mitochondrial respiratory chain complex I; P:ubiquinone biosynthetic process; P:cellular iron ion homeostasis; F:4 iron, 4 sulfur cluster binding; P:mitochondrial electron transport, NADH to ubiquinone; P:iron ion transport; P:mitochondrial respiratory chain complex I assembly; F:iron ion binding; P:electron transport EC:1.6.5.3  
contig10677 ---NA--- 431 0     0      
contig10678 toll-like receptor adaptor molecule 511 1 1.18E-11 62.00% 0      
contig10679 ribosomal protein s27 508 20 2.46E-38 98.35% 9 P:cell proliferation; F:structural constituent of ribosome; F:RNA binding; F:protein binding; P:zinc ion transport; P:signal transduction; C:cytosolic small ribosomal subunit; F:zinc ion binding; P:translation EC:3.6.5.3  
contig10680 coiled-coil domain containing 86 347 19 7.63E-10 82.63% 1 C:nucleus    
contig10681 ---NA--- 731 0     0      
contig10682 ---NA--- 260 0     0      
contig10683 ---NA--- 458 0     0      
contig10684 ---NA--- 233 0     0      
contig10685 ---NA--- 441 0     0      
contig10686 ---NA--- 300 0     0      
contig10687 ---NA--- 395 0     0      
contig10688 cell division cycle associated 3 1785 20 2.00E-92 53.10% 1 P:cellular process    
contig10689 ---NA--- 133 0     0      
contig10690 ---NA--- 311 0     0      
contig10691 ---NA--- 521 0     0      
contig10692 ---NA--- 258 0     0      
contig10693 ---NA--- 214 0     0      
contig10694 ---NA--- 496 0     0      
contig10695 mitochondrial ribosomal protein l15 1084 20 1.71E-132 85.55% 4 C:mitochondrial large ribosomal subunit; F:structural constituent of ribosome; P:translation; P:mitochondrial genome maintenance EC:3.6.5.3  
contig10696 ---NA--- 298 0     0      
contig10697 microspherule protein 1 816 20 2.19E-77 93.55% 4 C:nucleoplasm; C:cytoplasm; F:protein binding; P:protein modification process    
contig10698 swi snf matrix actin dependent regulator of subfamily member 1 814 20 4.40E-62 99.95% 11 P:regulation of transcription from RNA polymerase II promoter; C:XY body; P:retroviral genome replication; P:negative regulation of cell proliferation; P:cell differentiation; F:protein binding; C:SWI/SNF complex; P:blastocyst hatching; P:negative regulation of cell cycle; P:DNA integration; P:chromatin remodeling    
contig10699 ---NA--- 235 0     0      
contig10700 set translocation (myeloid leukemia-associated) 991 20 6.27E-123 96.45% 2 P:nucleosome assembly; C:nucleus    
100 Rows returned.
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