Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 10301 - 10400:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig10301 loc100002393 protein 831 3 3.80E-24 64.67% 0      
contig10302 voltage gated chloride channel domain-containing protein 996 20 4.85E-06 36.60% 6 F:nucleic acid binding; P:viral reproduction; P:P; F:zinc ion binding; C:host cell nucleus; C:C    
contig10303 ---NA--- 269 0     0      
contig10304 ---NA--- 222 0     0      
contig10305 ---NA--- 165 0     0      
contig10306 alpha- and gamma-adaptin-binding protein p34 781 20 1.84E-62 72.60% 1 C:cytoplasm    
contig10307 novel protein 1200 4 2.27E-19 52.75% 0      
contig10308 unnamed protein product [Tetraodon nigroviridis] 250 1 1.00E-06 94.00% 0      
contig10309 60s acidic ribosomal protein p0 932 20 2.47E-126 95.45% 4 C:ribosome; P:ribosome biogenesis; F:structural constituent of ribosome; P:translational elongation    
contig10310 ---NA--- 356 0     0      
contig10311 splicing factor subunit 1 1572 20 2.56E-173 90.90% 5 P:protein modification process; C:spliceosomal complex; F:RNA binding; F:protein binding; P:nuclear mRNA 3'-splice site recognition    
contig10312 ribophorin ii 642 20 4.95E-104 93.25% 5 C:oligosaccharyltransferase complex; F:protein binding; C:integral to membrane; F:dolichyl-diphosphooligosaccharide-protein glycotransferase activity; P:protein amino acid N-linked glycosylation via asparagine EC:2.4.1.119  
contig10313 cell division control protein 42 homolog precursor 243 20 8.79E-27 99.90% 0      
contig10314 periphilin 1 1835 20 7.12E-93 69.10% 3 F:F; P:P; C:nucleus    
contig10315 ---NA--- 171 0     0      
contig10316 ---NA--- 113 0     0      
contig10317 hiv-1 rev binding protein isoform 3 353 20 5.97E-23 67.35% 5 F:metal ion binding; C:neuronal cell body; C:cytoplasmic membrane-bounded vesicle; C:cell projection; P:acrosome assembly    
contig10318 ---NA--- 126 0     0      
contig10319 ---NA--- 701 0     0      
contig10320 protein phosphatase 2 (formerly 2a) regulatory subunit beta isoform 1903 20 7.08E-27 93.50% 2 F:antigen binding; F:protein heterodimerization activity    
contig10321 ---NA--- 221 0     0      
contig10322 ---NA--- 141 0     0      
contig10323   613              
contig10324 mitochondrial ribosomal protein s9 1042 20 6.99E-120 75.75% 5 C:mitochondrial small ribosomal subunit; F:structural constituent of ribosome; P:DNA damage response, detection of DNA damage; P:peptide biosynthetic process; P:translation EC:3.6.5.3  
contig10325 ---NA--- 283 0     0      
contig10326 conserved hypothetical protein [Pediculus humanus corporis] 1016 20 1.45E-21 53.90% 1 P:proteasome localization    
contig10327 atp-binding sub-family f member 1 218 20 3.54E-28 95.65% 8 C:ribosome; F:translation factor activity, nucleic acid binding; P:inflammatory response; F:ATPase activity, coupled to transmembrane movement of substances; F:ribosomal small subunit binding; F:ATP binding; P:translation; F:ribosomal large subunit binding EC:3.6.5.3  
contig10328 rio kinase 1 272 20 3.37E-18 74.70% 2 F:protein kinase activity; F:nucleotide binding    
contig10329 ---NA--- 131 0     0      
contig10330 yi011_danre ame: full=uncharacterized protein flj46082 homolog 201 3 3.38E-10 70.67% 0      
contig10331 eukaryotic translation elongation factor 2 2837 20 0 93.90% 7 C:cytoplasm; P:embryonic development; F:translation elongation factor activity; F:GTP binding; F:protein binding; P:translational elongation; F:GTPase activity EC:3.6.5.1; EC:3.6.5.2; EC:3.6.5.3; EC:3.6.5.4  
contig10332 ---NA--- 374 0     0      
contig10333 ---NA--- 224 0     0      
contig10334 ---NA--- 231 0     0      
contig10335 ---NA--- 1104 0     0      
contig10336 ---NA--- 177 0     0      
contig10337 ---NA--- 310 0     0      
contig10338 ---NA--- 224 0     0      
contig10339 ---NA--- 245 0     0      
contig10340 ---NA--- 136 0     0      
contig10341 ---NA--- 161 0     0      
contig10342 ---NA--- 239 0     0      
contig10343 ribosomal protein l36a 381 20 2.16E-49 98.20% 5 C:cytosolic ribosome; P:ribosome biogenesis; F:structural constituent of ribosome; F:protein binding; P:translation EC:3.6.5.3  
contig10344 ---NA--- 448 0     0      
contig10345 sperm associated antigen 7 233 20 2.59E-34 89.90% 3 C:nucleus; F:nucleic acid binding; F:protein binding    
contig10346 ---NA--- 271 0     0      
contig10347 ---NA--- 521 0     0      
contig10348 ---NA--- 597 0     0      
contig10349 vasa 2319 20 0 88.00% 3 F:nucleic acid binding; F:ATP binding; F:ATP-dependent helicase activity    
contig10350 ubiquitin-conjugating enzyme e2 d4 778 20 1.39E-78 95.45% 5 F:protein binding; P:ubiquitin cycle; P:proteasomal ubiquitin-dependent protein catabolic process; F:ubiquitin-protein ligase activity; P:regulation of protein metabolic process EC:6.3.2.19  
contig10351 ---NA--- 299 0     0      
contig10352 surfeit 2 807 20 2.61E-83 72.60% 3 F:F; P:P; C:C    
contig10353 unnamed protein product [Tetraodon nigroviridis] 202 1 4.27E-13 68.00% 0      
contig10354 ---NA--- 248 0     0      
contig10355 origin recognition subunit 3-like 651 20 1.07E-37 78.80% 6 P:DNA replication; F:DNA replication origin binding; C:nuclear origin of replication recognition complex; F:protein binding; F:cysteine-type endopeptidase activity; P:proteolysis EC:3.4.22.0  
contig10356 ---NA--- 1296 0     0      
contig10357 ---NA--- 348 0     0      
contig10358 ---NA--- 160 0     0      
contig10359 translocon-associated protein subunit beta precursor 1020 20 4.18E-85 98.40% 5 F:receptor activity; C:endoplasmic reticulum membrane; F:signal sequence binding; P:cotranslational protein targeting to membrane; C:integral to membrane    
contig10360 ---NA--- 187 0     0      
contig10361 ---NA--- 224 0     0      
contig10362 ---NA--- 421 0     0      
contig10363 ---NA--- 257 0     0      
contig10364 dynein light chain cytoplasmic 764 20 5.67E-45 94.70% 7 C:cytoplasm; P:microtubule-based movement; F:protein binding; P:visual behavior; C:cytoplasmic dynein complex; F:microtubule motor activity; C:microtubule    
contig10365 ribosomal protein s7 671 20 6.60E-102 98.15% 7 C:nucleolus; P:ribosome biogenesis; F:structural constituent of ribosome; F:RNA binding; F:protein binding; C:cytosolic small ribosomal subunit; P:translation EC:3.6.5.3  
contig10366 ---NA--- 304 0     0      
contig10367 ---NA--- 333 0     0      
contig10368 ---NA--- 182 0     0      
contig10369 xtp3-transactivated gene a protein homolog 994 20 2.13E-62 82.25% 1 F:identical protein binding    
contig10370 kif23 protein 1436 20 5.40E-66 78.45% 12 P:mitotic spindle elongation; P:microtubule-based movement; F:protein binding; P:mitosis; P:cytokinesis; P:embryonic cleavage; C:spindle; F:ATP binding; C:nucleus; C:kinesin complex; F:microtubule motor activity; C:microtubule    
contig10371 60s ribosomal protein l5 1009 20 5.42E-154 96.15% 4 C:ribosome; F:5S rRNA binding; F:structural constituent of ribosome; P:translation EC:3.6.5.3  
contig10372 ---NA--- 534 0     0      
contig10373 ribosomal protein l24 633 20 2.84E-56 94.60% 3 C:ribosome; F:structural constituent of ribosome; P:translation EC:3.6.5.3  
contig10374 ---NA--- 192 0     0      
contig10375 ---NA--- 97 0     0      
contig10376 ---NA--- 467 0     0      
contig10377 ---NA--- 149 0     0      
contig10378 high-mobility group box 2 889 20 3.80E-73 78.90% 13 F:double-stranded DNA binding; P:regulation of transcription from RNA polymerase II promoter; C:nuclear chromosome; P:DNA unwinding involved in replication; F:DNA bending activity; C:chromatin; F:transcription factor activity; P:nucleosome assembly; C:condensed chromosome; C:perinuclear region of cytoplasm; F:single-stranded DNA binding; P:base-excision repair, DNA ligation; P:phosphoinositide-mediated signaling    
contig10379 ---NA--- 535 0     0      
contig10380 ---NA--- 331 0     0      
contig10381 small edrk-rich factor 2 679 20 2.40E-14 87.05% 0      
contig10382 ---NA--- 164 0     0      
contig10383 ubiquitin-conjugating enzyme e2n 269 20 2.68E-15 94.50% 14 P:positive regulation of NF-kappaB transcription factor activity; P:regulation of histone ubiquitination; F:ubiquitin binding; P:ubiquitin-dependent protein catabolic process; C:UBC13-MMS2 complex; P:positive regulation of I-kappaB kinase/NF-kappaB cascade; F:ubiquitin-protein ligase activity; P:T cell receptor signaling pathway; P:positive regulation of histone modification; P:positive regulation of ubiquitin-protein ligase activity; P:DNA double-strand break processing; P:postreplication repair; C:nucleus; P:positive regulation of DNA repair EC:6.3.2.19  
contig10384 cdc28 protein kinase regulatory subunit 1b 543 20 4.03E-30 96.50% 6 F:kinase activity; P:regulation of cyclin-dependent protein kinase activity; F:cyclin-dependent protein kinase regulator activity; F:protein binding; P:cell division; P:cell proliferation    
contig10385 cytochrome b5 828 20 4.90E-48 78.30% 7 C:endoplasmic reticulum membrane; F:transition metal ion binding; P:response to cadmium ion; F:electron carrier activity; F:heme binding; C:mitochondrion; F:cytochrome-c oxidase activity EC:1.9.3.1  
contig10386 bub3 budding uninhibited by benzimidazoles 3 homolog 1229 20 2.29E-115 94.95% 5 P:cell proliferation; C:kinetochore; P:mitotic sister chromatid segregation; F:protein binding; C:nucleus    
contig10387 ---NA--- 249 0     0      
contig10388 ---NA--- 232 0     0      
contig10389 ---NA--- 339 0     0      
contig10390 lsm2 u6 small nuclear rna associated ( cerevisiae) 754 20 1.55E-47 97.45% 8 C:U6 snRNP; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ; P:mRNA catabolic process; F:U6 snRNA binding; F:protein kinase binding; C:U4/U6 x U5 tri-snRNP complex; C:cytoplasm    
contig10391 ---NA--- 209 0     0      
contig10392 small ubiquitin-related modifier 2 precursor 994 20 7.62E-44 97.40% 7 F:serine-type endopeptidase activity; P:protein sumoylation; F:protein binding; F:SUMO ligase activity; P:ubiquitin cycle; P:proteolysis; C:nucleus EC:3.4.21.0  
contig10393 ---NA--- 791 0     0      
contig10394 ribosomal protein l4 1173 20 4.22E-180 96.15% 6 F:oxidoreductase activity; F:structural constituent of ribosome; F:RNA binding; F:protein binding; C:cytosolic large ribosomal subunit; P:translation EC:3.6.5.3  
contig10395 ---NA--- 325 0     0      
contig10396 ---NA--- 204 0     0      
contig10397 ---NA--- 186 0     0      
contig10398 ---NA--- 225 0     0      
contig10399 ---NA--- 247 0     0      
contig10400 lysyl-trna synthetase 535 20 6.43E-62 92.30% 5 C:cytoplasm; F:nucleic acid binding; F:lysine-tRNA ligase activity; P:lysyl-tRNA aminoacylation; F:ATP binding EC:6.1.1.6  
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