Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 10201 - 10300:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig10201 centrin-1 708 20 8.98E-23 88.60% 1 F:calcium ion binding    
contig10202 ---NA--- 240 0     0      
contig10203 serine threonine-protein phosphatase pp1 844 20 9.94E-28 88.90% 15 P:chromatin modification; P:cytokinesis; P:meiosis; P:oviposition; P:embryonic development ending in birth or egg hatching; C:nuclear membrane; F:manganese ion binding; P:molting cycle, collagen and cuticulin-based cuticle; P:cellular iron ion homeostasis; P:iron ion transport; P:mitosis; C:chromosome; F:phosphoprotein phosphatase activity; C:cytoplasm; F:iron ion binding EC:3.1.3.16  
contig10204 ---NA--- 241 0     0      
contig10205 ---NA--- 252 0     0      
contig10206 ---NA--- 617 0     0      
contig10207 ---NA--- 785 0     0      
contig10208 ---NA--- 244 0     0      
contig10209 y box binding protein 1 1433 20 8.84E-85 69.65% 12 F:transcription regulator activity; F:mRNA binding; F:p53 binding; P:positive regulation of transcription from RNA polymerase II promoter; C:dendrite; P:negative regulation of insulin receptor signaling pathway; F:sequence-specific DNA binding; C:perinuclear region of cytoplasm; F:single-stranded DNA binding; P:positive regulation of cell proliferation; P:negative regulation of apoptosis; C:nucleus    
contig10210 ---NA--- 235 0     0      
contig10211 nadh dehydrogenase 1 subunit c2 602 20 6.60E-49 77.40% 2 P:mitochondrial electron transport, NADH to ubiquinone; C:mitochondrial inner membrane    
contig10212 ---NA--- 268 0     0      
contig10213 ---NA--- 130 0     0      
contig10214 pak1 interacting protein 1 1254 20 3.15E-128 82.60% 2 P:negative regulation of signal transduction; C:nucleus    
contig10215 ---NA--- 576 0     0      
contig10216 mitochondrial ribosomal protein s18c 311 20 2.64E-15 84.30% 3 C:mitochondrial small ribosomal subunit; F:structural constituent of ribosome; P:translation EC:3.6.5.3  
contig10217 tripeptidyl peptidase i 2382 20 3.40E-170 85.10% 16 P:lysosome organization; P:positive regulation of proteolysis; F:peptide binding; C:lysosome; C:soluble fraction; C:mitochondrion; P:peptide catabolic process; F:aminopeptidase activity; C:extracellular space; P:neuromuscular process controlling balance; C:melanosome; F:subtilase activity; P:nervous system development; F:protein binding; F:tripeptidyl-peptidase I activity; P:bone resorption EC:3.4.11.0; EC:3.4.14.9  
contig10218 poly binding cytoplasmic 1 859 20 1.49E-127 68.90% 7 P:chordate embryonic development; F:protein self-association; F:poly(A) RNA binding; P:negative regulation of nuclear-transcribed mRNA poly(A) tail shortening; P:mRNA stabilization; C:cytoplasm; F:eukaryotic initiation factor 4G binding    
contig10219 riken cdna 4932409i22 gene 743 20 2.42E-05 66.80% 0      
contig10220 ---NA--- 229 0     0      
contig10221 ---NA--- 227 0     0      
contig10222 ---NA--- 207 0     0      
contig10223 ---NA--- 241 0     0      
contig10224 ---NA--- 414 0     0      
contig10225 ---NA--- 1038 0     0      
contig10226 ---NA--- 230 0     0      
contig10227 ---NA--- 290 0     0      
contig10228 ---NA--- 285 0     0      
contig10229 ---NA--- 262 0     0      
contig10230 ---NA--- 348 0     0      
contig10231 ---NA--- 184 0     0      
contig10232 ---NA--- 215 0     0      
contig10233 thioredoxin 567 20 3.04E-26 78.05% 3 P:cell redox homeostasis; P:transport; P:electron transport    
contig10234 ---NA--- 202 0     0      
contig10235 ---NA--- 115 0     0      
contig10236 ---NA--- 173 0     0      
contig10237 ---NA--- 772 0     0      
contig10238 ---NA--- 630 0     0      
contig10239 replication protein 32kda 1296 20 3.66E-127 75.95% 6 P:base-excision repair; P:DNA-dependent DNA replication; F:single-stranded DNA binding; C:DNA replication factor A complex; F:protein N-terminus binding; P:nucleotide-excision repair    
contig10240 coenzyme q7 ubiquinone 881 20 5.04E-70 85.35% 6 P:protein metabolic process; F:transition metal ion binding; F:oxidoreductase activity; P:ubiquinone biosynthetic process; C:nucleus; C:mitochondrion    
contig10241 ---NA--- 478 0     0      
contig10242 tyrosine 3-monooxygenase tryptophan 5-monooxygenase activation beta polypeptide 1028 20 3.74E-118 95.35% 4 F:protein domain specific binding; C:melanosome; P:protein targeting; C:perinuclear region of cytoplasm    
contig10243 ---NA--- 250 0     0      
contig10244 ribosomal protein l13a 382 20 9.39E-53 99.10% 3 F:structural constituent of ribosome; C:large ribosomal subunit; P:translation EC:3.6.5.3  
contig10245 ---NA--- 205 0     0      
contig10246 ---NA--- 265 0     0      
contig10247 ---NA--- 148 0     0      
contig10248 ---NA--- 425 0     0      
contig10249 adipose differentiation-related protein 1224 20 3.05E-27 52.25% 3 C:membrane; C:cytoplasm; P:response to chemical stimulus    
contig10250 ---NA--- 288 0     0      
contig10251 ---NA--- 425 0     0      
contig10252 ---NA--- 256 0     0      
contig10253 karyopherin alpha 2 (rag cohort importin alpha 1) 146 20 9.70E-21 86.00% 5 C:cytoplasm; C:nuclear pore; P:protein import into nucleus; F:binding; F:protein transporter activity    
contig10254 cyclin b 165 20 1.01E-22 91.80% 3 P:mitosis; C:nucleus; P:cell division    
contig10255 ---NA--- 336 0     0      
contig10256 ---NA--- 125 0     0      
contig10257 suppressor of ty 7 ( cerevisiae)-like 643 20 9.87E-28 64.45% 2 F:protein binding; P:maintenance of protein location in nucleus    
contig10258 ---NA--- 265 0     0      
contig10259 ---NA--- 243 0     0      
contig10260 ---NA--- 110 0     0      
contig10261 ---NA--- 424 0     0      
contig10262 ---NA--- 245 0     0      
contig10263 ---NA--- 315 0     0      
contig10264 regulator of chromosome condensation 2 834 20 2.61E-73 94.20% 5 C:chromosome, centromeric region; P:mitosis; C:microtubule; C:nucleus; P:cell division    
contig10265 unnamed protein product [Tetraodon nigroviridis] 1075 1 4.60E-13 46.00% 0      
contig10266 isy1 splicing factor homolog ( cerevisiae) 505 20 4.88E-15 92.30% 3 P:mRNA processing; C:spliceosomal complex; P:RNA splicing    
contig10267 ---NA--- 220 0     0      
contig10268 choriogenin l 1255 20 1.38E-91 64.65% 1 C:viral envelope    
contig10269 ---NA--- 188 0     0      
contig10270 hypothetical protein PBPRA0374 [Photobacterium profundum SS9] 253 1 6.30E-04 52.00% 0      
contig10271 ---NA--- 413 0     0      
contig10272 ---NA--- 244 0     0      
contig10273 ---NA--- 155 0     0      
contig10274 elongation of very long chain fatty acids-like 6 1928 20 9.16E-115 82.50% 5 C:integral to endoplasmic reticulum membrane; F:transferase activity, transferring acyl groups other than amino-acyl groups; C:membrane attack complex; P:fatty acid elongation; C:mitochondrion EC:2.3.1.0  
contig10275 ---NA--- 290 0     0      
contig10276 lin-37 homolog 910 20 2.56E-80 74.45% 1 F:protein binding    
contig10277 valosin containing protein 1989 20 0 84.15% 16 C:cytosol; P:ER-associated protein catabolic process; P:double-strand break repair; P:protein homooligomerization; F:lipid binding; P:activation of caspase activity; F:ATP binding; P:protein ubiquitination; C:microsome; F:ATPase activity; F:protein binding; P:retrograde protein transport, ER to cytosol; P:ER to Golgi vesicle-mediated transport; C:endoplasmic reticulum; C:nucleus; P:endoplasmic reticulum unfolded protein response    
contig10278 ---NA--- 607 0     0      
contig10279 ribosomal protein l35a 488 20 3.36E-58 92.90% 5 C:ribosome; F:structural constituent of ribosome; F:protein binding; P:translation; F:tRNA binding EC:3.6.5.3  
contig10280 mitochondrial ribosomal protein l12 1149 20 1.01E-69 76.80% 7 P:translation; C:mitochondrial large ribosomal subunit; F:RNA binding; F:structural constituent of ribosome; P:transcription from mitochondrial promoter; F:protein binding; P:positive regulation of transcription, DNA-dependent EC:3.6.5.3  
contig10281 mitochondrial ribosomal protein l20 1665 20 1.42E-68 85.15% 4 C:mitochondrial large ribosomal subunit; F:structural constituent of ribosome; F:RNA binding; P:translation EC:3.6.5.3  
contig10282 novel protein 203 4 8.34E-09 77.25% 0      
contig10283 ---NA--- 321 0     0      
contig10284 ---NA--- 106 0     0      
contig10285 ---NA--- 212 0     0      
contig10286 ---NA--- 217 0     0      
contig10287 ---NA--- 243 0     0      
contig10288 ---NA--- 238 0     0      
contig10289 im:6894757 protein 1036 11 2.99E-22 48.55% 0      
contig10290 phosphatidylinositol n-acetylglucosaminyltransferase subunit y 588 11 4.80E-25 91.91% 5 C:endoplasmic reticulum membrane; P:GPI anchor biosynthetic process; C:plasma membrane; C:integral to membrane; C:glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex    
contig10291 ---NA--- 1430 0     0      
contig10292 ---NA--- 244 0     0      
contig10293 ---NA--- 239 0     0      
contig10294 ---NA--- 304 0     0      
contig10295 trna splicing endonuclease 15 homolog ( cerevisiae) 1229 20 2.67E-47 62.10% 1 F:protein binding    
contig10296 ---NA--- 367 0     0      
contig10297 g elongation mitochondrial 1 501 20 2.06E-13 88.40% 5 F:translation elongation factor activity; F:GTP binding; C:mitochondrion; P:translational elongation; F:GTPase activity EC:3.6.5.1; EC:3.6.5.2; EC:3.6.5.3; EC:3.6.5.4  
contig10298 ---NA--- 164 0     0      
contig10299 cytochrome b-c1 complex subunit mitochondrial precursor 550 20 1.83E-30 86.75% 4 F:ubiquinol-cytochrome-c reductase activity; P:transport; P:mitochondrial electron transport, ubiquinol to cytochrome c; C:mitochondrial respiratory chain EC:1.10.2.2  
contig10300 nucleolar complex associated 4 homolog ( cerevisiae) 365 20 8.80E-11 77.95% 1 C:membrane    
100 Rows returned.
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