Striped Bass Ovarian Transcriptome Sequence Contigs

 Records 10001 - 10100:
Sequence Name Description Length Blast Hits min E-value Similarity GO hits GO names Enzyme Codes InterPro Scan
contig10001 ---NA--- 467 0     0      
contig10002 ---NA--- 213 0     0      
contig10003 branched chain keto acid dehydrogenase alpha polypeptide 538 20 5.72E-74 90.30% 12 F:alpha-ketoacid dehydrogenase activity; F:potassium ion binding; P:branched chain family amino acid catabolic process; F:3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity; P:response to nutrient; F:protein complex binding; P:response to glucocorticoid stimulus; C:mitochondrial alpha-ketoglutarate dehydrogenase complex; P:positive regulation of transcription, DNA-dependent; F:cyclin-dependent protein kinase 5 activator regulator activity; F:carboxy-lyase activity; P:response to cAMP EC:1.2.4.4; EC:4.1.1.0  
contig10004 ---NA--- 463 0     0      
contig10005 glyceraldehyde-3-phosphate dehydrogenase 772 20 3.38E-129 93.30% 7 F:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity; F:NAD or NADH binding; P:sperm motility; F:protein binding; P:positive regulation of glycolysis; C:microtubule-based flagellum; C:cytoplasm EC:1.2.1.12  
contig10006 ---NA--- 404 0     0      
contig10007 ---NA--- 301 0     0      
contig10008 o-sialoglycoprotein endopeptidase-like 1 426 20 5.02E-38 78.70% 5 F:metal ion binding; P:zinc ion transport; F:metalloendopeptidase inhibitor activity; P:proteolysis; F:O-sialoglycoprotein endopeptidase activity EC:3.4.24.57  
contig10009 dead (asp-glu-ala-asp) box polypeptide 49 1241 20 2.67E-168 91.20% 3 F:RNA binding; F:ATP binding; F:ATP-dependent helicase activity    
contig10010 ---NA--- 489 0     0      
contig10011 ---NA--- 137 0     0      
contig10012 caseinolytic atp- proteolytic subunit homolog ( coli) 344 20 1.33E-40 89.95% 3 F:endopeptidase Clp activity; P:misfolded or incompletely synthesized protein catabolic process; C:mitochondrion EC:3.4.21.92  
contig10013 caax beta 598 20 4.14E-112 84.65% 7 F:protein farnesyltransferase activity; P:wound healing; P:negative regulation of cell proliferation; F:protein binding; F:farnesyltranstransferase activity; P:positive regulation of fibroblast proliferation; F:zinc ion binding EC:2.5.1.58; EC:2.5.1.29  
contig10014 ---NA--- 1072 0     0      
contig10015 heat shock protein 90 1900 20 0 96.60% 9 P:protein folding; F:nitric-oxide synthase regulator activity; F:TPR domain binding; C:melanosome; P:response to stress; F:ATP binding; F:unfolded protein binding; P:positive regulation of nitric oxide biosynthetic process; C:mitochondrion    
contig10016 ---NA--- 447 0     0      
contig10017 ---NA--- 252 0     0      
contig10018 angiotensin ii receptor-associated protein 708 20 1.98E-54 69.65% 3 C:cytoplasmic part; C:membrane part; C:intracellular membrane-bounded organelle    
contig10019 selenoprotein k 374 20 6.43E-17 84.85% 2 C:integral to membrane; F:selenium binding    
contig10020 ---NA--- 871 0     0      
contig10021 tripartite motif-containing protein 25 270 20 1.12E-21 67.45% 1 F:binding    
contig10022 ---NA--- 280 0     0      
contig10023 transmembrane protein 93 843 20 3.31E-23 92.95% 1 C:membrane attack complex    
contig10024 ---NA--- 338 0     0      
contig10025 ---NA--- 257 0     0      
contig10026 ubiquitin-conjugating enzyme e2c binding protein 440 20 5.66E-26 56.10% 3 F:ligase activity; C:cytoplasm; P:ubiquitin cycle    
contig10027 neurite outgrowth associated 331 20 2.08E-34 77.90% 2 P:multicellular organismal development; C:nucleus    
contig10028 ---NA--- 250 0     0      
contig10029 ---NA--- 308 0     0      
contig10030 ---NA--- 261 0     0      
contig10031 haus augmin-like subunit 3 386 13 6.52E-30 59.62% 2 P:proteolysis; F:serine-type peptidase activity    
contig10032 ---NA--- 260 0     0      
contig10033 ---NA--- 173 0     0      
contig10034 ---NA--- 298 0     0      
contig10035 nuclear autoantigenic sperm protein (histone-binding) 1253 20 2.36E-75 64.80% 3 F:binding; C:intracellular organelle; P:cellular process    
contig10036 dynein light chain cytoplasmic 944 20 1.36E-23 97.90% 20 F:microtubule motor activity; F:cytoskeletal protein binding; P:positive regulation of growth rate; P:embryonic development ending in birth or egg hatching; C:microtubule; C:myosin complex; F:ATPase activity, coupled; P:imaginal disc-derived wing morphogenesis; P:hermaphrodite genitalia development; P:pronuclear migration; P:spermatogenesis; C:cytoplasmic dynein complex; P:body morphogenesis; P:microtubule-based movement; P:nematode larval development; P:synaptic target recognition; P:locomotion; P:bristle morphogenesis; P:morphogenesis of an epithelium; C:cytoplasm    
contig10037 loc440957 protein 286 20 6.47E-17 75.70% 3 C:ribosome; F:structural constituent of ribosome; P:translation EC:3.6.5.3  
contig10038 ---NA--- 435 0     0      
contig10039 ---NA--- 296 0     0      
contig10040 h+ lysosomal v1 subunit f 824 20 1.89E-60 93.00% 5 F:hydrogen ion transporting ATP synthase activity, rotational mechanism; P:ATP synthesis coupled proton transport; C:membrane fraction; F:proton-transporting ATPase activity, rotational mechanism; C:proton-transporting two-sector ATPase complex EC:3.6.3.14  
contig10041 ubiquitin-conjugating enzyme e2n 296 20 6.38E-25 96.20% 15 P:positive regulation of NF-kappaB transcription factor activity; P:regulation of histone ubiquitination; F:ubiquitin binding; C:cytoplasm; P:ubiquitin-dependent protein catabolic process; C:UBC13-MMS2 complex; P:positive regulation of I-kappaB kinase/NF-kappaB cascade; F:ubiquitin-protein ligase activity; P:T cell receptor signaling pathway; P:positive regulation of histone modification; P:positive regulation of ubiquitin-protein ligase activity; P:DNA double-strand break processing; P:postreplication repair; C:nucleus; P:positive regulation of DNA repair EC:6.3.2.19  
contig10042 ---NA--- 250 0     0      
contig10043 ---NA--- 337 0     0      
contig10044 60s acidic ribosomal protein p2 437 20 9.69E-26 80.80% 3 C:ribosome; F:structural constituent of ribosome; P:translational elongation    
contig10045 ---NA--- 273 0     0      
contig10046 ---NA--- 624 0     0      
contig10047 ---NA--- 278 0     0      
contig10048 ubiquitin 169 20 5.36E-24 99.50% 0      
contig10049 ---NA--- 240 0     0      
contig10050 ---NA--- 245 0     0      
contig10051 basic transcription factor 3-like 4 501 20 6.41E-15 96.90% 2 F:F; P:P    
contig10052 ---NA--- 247 0     0      
contig10053 oxysterol binding 9 251 20 3.68E-17 70.05% 5 P:lipid transport; P:steroid metabolic process; F:F; C:C; P:transport    
contig10054 myeloma overexpressed 2 397 20 1.21E-15 93.70% 2 P:P; C:C    
contig10055 ---NA--- 569 0     0      
contig10056 coiled-coil domain containing 58 745 20 2.75E-65 89.05% 2 P:P; C:C    
contig10057 ---NA--- 854 0     0      
contig10058 beta-actin 1874 20 0 99.45% 5 C:cytoskeleton; C:cytoplasm; F:ATP binding; F:structural molecule activity; F:protein binding    
contig10059 ---NA--- 492 0     0      
contig10060 ---NA--- 352 0     0      
contig10061 ---NA--- 408 0     0      
contig10062 ---NA--- 390 0     0      
contig10063 ---NA--- 337 0     0      
contig10064 glycolipid transfer protein domain containing 1 453 20 1.66E-33 75.60% 4 F:glycolipid transporter activity; C:cytoplasm; F:glycolipid binding; P:glycolipid transport    
contig10065 ---NA--- 266 0     0      
contig10066 chromobox protein homolog 3 1210 20 2.41E-85 83.35% 4 P:chromatin assembly or disassembly; C:chromatin; C:nucleus; F:chromatin binding    
contig10067 ---NA--- 294 0     0      
contig10068 ---NA--- 479 0     0      
contig10069 ---NA--- 446 0     0      
contig10070 coiled-coil domain containing 36 381 12 1.52E-10 51.75% 0      
contig10071 wd repeat domain 18 1445 20 0 80.55% 3 C:membrane; F:hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances; P:proton transport EC:3.6.3.0  
contig10072 ---NA--- 317 0     0      
contig10073 ---NA--- 146 0     0      
contig10074 ---NA--- 372 0     0      
contig10075 ---NA--- 309 0     0      
contig10076 ---NA--- 243 0     0      
contig10077 ---NA--- 262 0     0      
contig10078 ---NA--- 447 0     0      
contig10079 ---NA--- 811 0     0      
contig10080 guanine nucleotide binding 3 -like 1385 20 0 78.40% 2 C:intracellular; F:GTP binding    
contig10081 ---NA--- 340 0     0      
contig10082 dead (asp-glu-ala-asp) box polypeptide 56 1539 20 5.44E-128 74.95% 5 C:nucleolus; F:ATP-dependent RNA helicase activity; F:nucleic acid binding; F:protein binding; F:ATP binding    
contig10083 cyclin a2 2108 20 1.79E-159 75.05% 5 P:mitotic cell cycle G2/M transition DNA damage checkpoint; P:cell division; C:pronucleus; F:protein binding; P:retina development in camera-type eye    
contig10084 ---NA--- 304 0     0      
contig10085 ---NA--- 413 0     0      
contig10086 ---NA--- 410 0     0      
contig10087 ---NA--- 427 0     0      
contig10088 suppression of tumorigenicity 13 (colon carcinoma) (hsp70 interacting protein) 1829 20 1.05E-120 75.25% 5 P:protein folding; F:protein binding, bridging; C:cytoplasm; F:Hsp70 protein binding; F:protein domain specific binding    
contig10089 ---NA--- 339 0     0      
contig10090 ---NA--- 357 0     0      
contig10091 ---NA--- 268 0     0      
contig10092 ---NA--- 321 0     0      
contig10093 ---NA--- 414 0     0      
contig10094 ---NA--- 498 0     0      
contig10095 ---NA--- 421 0     0      
contig10096 thioredoxin-like 4b 679 20 2.13E-79 91.30% 3 C:spliceosomal complex; P:mitosis; P:nuclear mRNA splicing, via spliceosome    
contig10097 taf9 rna polymerase tata box binding protein -associated factor 1033 20 5.34E-80 90.30% 10 F:adenylate kinase activity; F:shikimate kinase activity; P:transcription initiation; P:regulation of transcription, DNA-dependent; F:protein C-terminus binding; F:DNA binding; F:ATP binding; F:transcription coactivator activity; C:transcription factor TFIID complex; P:transcription from RNA polymerase II promoter EC:2.7.4.3; EC:2.7.1.71  
contig10098 ---NA--- 337 0     0      
contig10099 pterin-4-alpha-carbinolamine dehydratase 2 477 20 8.46E-38 90.90% 8 P:protein heterooligomerization; P:tetrahydrobiopterin biosynthetic process; F:protein binding; F:4-alpha-hydroxytetrahydrobiopterin dehydratase activity; P:protein homotetramerization; P:positive regulation of transcription, DNA-dependent; F:phenylalanine 4-monooxygenase activity; C:nucleus EC:4.2.1.96; EC:1.14.16.1  
contig10100 copper transport protein atox1 1529 20 4.84E-28 77.30% 6 P:copper ion transport; F:copper-dependent protein binding; P:response to oxidative stress; P:cellular copper ion homeostasis; F:copper chaperone activity; C:cytosol    
100 Rows returned.
Go to records:
1-100, 101-200, 201-300, 301-400, 401-500, 501-600, 601-700, 701-800, 801-900, 901-1000, 1001-1100, 1101-1200, 1201-1300, 1301-1400, 1401-1500, 1501-1600, 1601-1700, 1701-1800, 1801-1900, 1901-2000, 2001-2100, 2101-2200, 2201-2300, 2301-2400, 2401-2500, 2501-2600, 2601-2700, 2701-2800, 2801-2900, 2901-3000, 3001-3100, 3101-3200, 3201-3300, 3301-3400, 3401-3500, 3501-3600, 3601-3700, 3701-3800, 3801-3900, 3901-4000, 4001-4100, 4101-4200, 4201-4300, 4301-4400, 4401-4500, 4501-4600, 4601-4700, 4701-4800, 4801-4900, 4901-5000, 5001-5100, 5101-5200, 5201-5300, 5301-5400, 5401-5500, 5501-5600, 5601-5700, 5701-5800, 5801-5900, 5901-6000, 6001-6100, 6101-6200, 6201-6300, 6301-6400, 6401-6500, 6501-6600, 6601-6700, 6701-6800, 6801-6900, 6901-7000, 7001-7100, 7101-7200, 7201-7300, 7301-7400, 7401-7500, 7501-7600, 7601-7700, 7701-7800, 7801-7900, 7901-8000, 8001-8100, 8101-8200, 8201-8300, 8301-8400, 8401-8500, 8501-8600, 8601-8700, 8701-8800, 8801-8900, 8901-9000, 9001-9100, 9101-9200, 9201-9300, 9301-9400, 9401-9500, 9501-9600, 9601-9700, 9701-9800, 9801-9900, 9901-10000, 10001-10100, 10101-10200, 10201-10300, 10301-10400, 10401-10500, 10501-10600, 10601-10700, 10701-10800, 10801-10900, 10901-11000, 11001-11100, 11101-11200, 11201-11208
Web Access Statistics © 2003-2025 NAGRP - Bioinformatics Coordination Program.
Contact: NAGRP Bioinformatics Team 		Helpdesk