Release 56
(Apr 24, 2025)

QTL 8641 Description:

 Trait Information
Trait name: Subcutaneous fat thickness Vertebrate Trait Ontology: Subcutaneous adipose thickness
Trait details: lumbar back fat Product Trait Ontology: n/a
Symbol: LUMBF Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:2
QTL Peak Location:63 (cM)
QTL Span:64.95-65.96 (cM)
85.8-88.0 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:-
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Suggestive
P_values0.077
Dominance effect:n/a
Additive effect:n/a
Associated Gene:TEF1 (transcriptional enhancer factor 1)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were from a Berkshire x Yorkshire resource family, or of the following breeds: Tongcheng, Swedish Landrace, Large White, Large White x Tongcheng, Landrace x Tongcheng.
     Breeds associated:
    n/a
    Design:Animals were genotyped for a SNP in TEF1 and analyzed for growth and fatness traits.
    Analysis:A regression model was used.
    Software:CRIMAP
    Notes: 
    Links:Edit

     Reference
    Authors:Xu, X; Xing, S; Du, Z Q; Rothschild, M F; Yerle, M; Liu, B
    Affiliation:Key Laboratory of Agricultural Animal Genetics, Breeding and Reproduction of Ministry of Education, Huazhong Agricultural University, Wuhan 430070, China
    Title:Porcine TEF1 and RTEF1: molecular characterization and association analyses with growth traits.
    Journal:Comparative Biochemistry and Physiology, Part B, 2008, 150 (4): 447-53
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #18558506
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  • Cite this Data:

    Animal QTLdb: QTL8641 was published in 2008, and was curated into QTLdb on 2012-07-31. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:8641

     

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