Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 682 Description:

 Trait Information
Trait name: Subcutaneous fat thickness Vertebrate Trait Ontology: Subcutaneous adipose thickness
Trait details: backfat thickness at last rib Product Trait Ontology: n/a
Symbol: SUBCFAT Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:6
QTL Peak Location:89 (cM)
QTL Span:72-93 (cM)
30.7-66.8 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:-
Analysis type:QTL
Model tested:n/a
Test base:n/a
Threshold significance level:n/a
F_Stat22.89
Dominance effect:-0.18
Additive effect:0.26
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #682
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  •  QTL Experiment in Brief
    Animals:A resource populatin from an intercross between Iberian and Landrace pigs. 577 F2 from 6 boars and 57 sows were used.
     Breeds associated:
    n/a
    Design:A genome wide scan using 96 markers across 18 autosomal chromosomes for QTL detection.
    Analysis:Regression interval mapping.
    Software:CRIMAP 2.4; Haley's QTLprogram.
    Notes: 
    Links:Edit

     Reference
    Authors:Varona L, Ovilo C, Clop A, Noguera JL, Perez-Enciso M, Coll A, Folch JM,Barragan C, Toro MA, Babot D, Sanchez A.
    Affiliation:Area de Produccio Animal, Centre UdL-IRTA, C/Rovira Roure 177, 25198 Lleida,Spain. Luis.Varona@irta.es
    Title:QTL mapping for growth and carcass traits in an Iberian by Landrace pigintercross: additive, dominant and epistatic effects.
    Journal:Genet Res., 2002, Oct;80(2):145-54.
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #12534217
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  • Cite this Data:

    Animal QTLdb: QTL682 was published in 2002, and was curated into QTLdb on 2011-11-11. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:682

     

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