Release 56
(Apr 24, 2025)

QTL 65994 Description:

 Trait Information
Trait name: Muscle pH Vertebrate Trait Ontology: Muscle pH regulation trait
Trait details: pH at 45 min post-mortem in semimembranosus Product Trait Ontology: Meat pH
Symbol: MPH Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:2
QTL Peak Location:54.13 (cM)
QTL Span:54.13-54.13 (cM)
68.9-68.9 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs196959993
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Suggestive
LikelihoodR4.290
P_values0.038
Dominance effect:n/a
Additive effect:n/a
Associated Gene:UBL5 (ubiquitin-like 5)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Pigs were from a commercial Landrace x Chinese-European crossbred population. Animal breed (IDs) involved:
     Breeds associated:
    n/a
    Design:Animals were genotyped for SNPs in four genes (UBL5, RETN, INSR, and CFD) on chromosome 2 and analyzed for growth, fatness, and meat quality traits.
    Analysis:A standard animal model was used.
    Software: 
    Notes: 
    Links:Edit

     Reference
    Authors:Cepica S, Ovilo C, Masopust M, Knoll A, Fernandez A, Lopez A, Rohrer G A, Nonneman D
    Affiliation:Institute of Animal Physiology and Genetics, AS CR, Liběchov, Czech Republic
    Title:Four genes located on a SSC2 meat quality QTL region are associated with different meat quality traits in Landrace x Chinese-European crossbred population
    Journal:Animal genetics, 2012, 43(3): 333-6
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #22486507
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  • Cite this Data:

    Animal QTLdb: QTL65994 was published in 2012, and was curated into QTLdb on 2016-02-08. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:65994

     

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