Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 5573 Description:

 Trait Information
Trait name: Muscle pH decline Vertebrate Trait Ontology: Muscle pH regulation trait
Trait details: change in pH/hr, 45 min-3 hr post-mortem (longissimus dorsi) Product Trait Ontology: n/a
Symbol: PHDEC Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:10
QTL Peak Location:45 (cM)
QTL Span:35.40-35.50 (cM)
15.2-15.3 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:-
Analysis type:QTL
Model tested:Mendelian
Test base:Chromosome-wise
Threshold significance level:Significant
F_Stat5.3
P_values<0.05
Dominance effect:-0.02
Additive effect:-0.04
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #5573
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  •  QTL Experiment in Brief
    Animals:Animals were a cross between Finnish Landrace and Swedish Hampshire.
     Breeds associated:
    Design:A combined intercross/backcross design was employed. Animals were genotyped for 121 microsatellite markers and analyzed for 39 meat quality traits.
    Analysis:A multiple linear regression model was used.
    Software:CRI-MAP, MiniTab, QTL Express
    Notes: 
    Links:Edit

     Reference
    Authors:Markljung, Ellen; Braunschweig, Martin H; Karlskov-Mortensen, Peter; Bruun, Camilla S; Sawera, Milena; Cho, In-Cheol; Hedebro-Ve
    Affiliation:Department of Medical Biochemistry and Microbiology, Uppsala University, Box 597, SE-751 24 Uppsala, Sweden; leif.andersson@imbim.uu.se
    Title:Genome-wide identification of quantitative trait loci in a cross between Hampshire and Landrace II: meat quality traits.
    Journal:BMC genetics, 2008, 9: 22
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #18304368
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  • Cite this Data:

    Animal QTLdb: QTL5573 was published in 2008, and was curated into QTLdb on 2009-06-19. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:5573

     

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