Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 55 Description:

 Trait Information
Trait name: Subcutaneous fat thickness Vertebrate Trait Ontology: Subcutaneous adipose thickness
Trait details: last rib back fat Product Trait Ontology: n/a
Symbol: LRIBF Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:5
QTL Peak Location:134.4 (cM)
QTL Span:111.1-145.9 (cM)
78.6-109.6 (Mbp)
Upper, "Suggestive":SWR1974
Upper, "Significant":SW995
Peak:SW378
Lower, "Significant":-
Lower, "Suggestive":SW967
Marker type:Microsatellites
Analysis type:QTL
Model tested:n/a
Test base:n/a
Threshold significance level:n/a
F_Stat9.51
VARIANCE4.83
Dominance effect:0.06
Additive effect:0.04
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #55
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Three generation resource family from Berkshire sires and Yorkshire dams, yielding 525 F2.
     Breeds associated:
    n/a
    Design:Genome scan with 125 markers on 525 F2 progeny from 65 matings.
    Analysis:Least square regression interval mapping. F Thresholds: 5% - 8.22; 1% - 9.96.
    Software:Haley's QTLprogram
    Notes: 
    Links:Edit

     Reference
    Authors:Malek M, Dekkers JC, Lee HK, Baas TJ, Rothschild MF.
    Affiliation:Department of Animal Science, 2255H Kildee Hall, Iowa State University, Ames,Iowa 50011, USA.
    Title:A molecular genome scan analysis to identify chromosomal regions influencingeconomic traits in the pig. I. Growth and body composition.
    Journal:Mammalian genome, 2001, Aug;12(8):630-6.
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #11471058
  • Add your comments
  • Note similar findings
  • Note contradictions
  • Cite this Data:

    Animal QTLdb: QTL55 was published in 2001, and was curated into QTLdb on 2011-11-11. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:55

     

    © 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team