Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 5178 Description:

 Trait Information
Trait name: Longissimus muscle area Vertebrate Trait Ontology: Longissimus thoracis muscle area
Reported name: Loin muscle area Product Trait Ontology: n/a
Symbol: LMA Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:9
QTL Peak Location:71 (cM)
QTL Span:57.1-86.4 (cM)
45.3-109.6 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":SW2401
Peak:
Lower, "Significant":S0019
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:QTL
Model tested:Paternally imprinted
Test base:Chromosome-wise
Threshold significance level:Significant
F_Stat5.25
VARIANCE5.0
P_values<0.05
Dominance effect:-1.199
Additive effect:1.049
Associated Gene:n/a
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #5178
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  •  QTL Experiment in Brief
    Animals:Animals were cross-bred Pietrain, Large White, Landrace, and Leicoma.
     Breeds associated:
    Design:A full-sib design was utilized. Animals were genotyped for 51 microsatellite markers and analyzed for body composition and growth traits.
    Analysis:Least-squares, multi-marker regression interval mapping was employed.
    Software:QTL Express
    Notes: 
    Links:Edit

     Reference
    Authors:Duthie, C; Simm, G; Doeschl-Wilson, A; Kalm, E; Knap, P W; Roehe, R
    Affiliation:Scottish Agricultural College, Edinburgh, UK; Christian-Albrechts-University of Kiel, Kiel, Germany; PIC Germany, Schleswig, Germany
    Title:Quantitative trait loci for chemical body composition traits in pigs and their positional associations with body tissues, growth and feed intake.
    Journal:Animal genetics, 2008, 39 (2): 130-40
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #18307580
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  • Cite this Data:

    Animal QTLdb: QTL5178 was published in 2008, and was curated into QTLdb on 2009-07-28. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:5178

     

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