Release 56
(Apr 24, 2025)

QTL 4967 Description:

 Trait Information
Trait name: Subcutaneous fat thickness Vertebrate Trait Ontology: Subcutaneous adipose thickness
Trait details: backfat thickness at first rib Product Trait Ontology: n/a
Symbol: SUBCFAT Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:6
QTL Peak Location:121.3 (cM)
QTL Span:100.32-100.37 (cM)
73.2-73.3 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:-
Analysis type:Association
Model tested:Mendelian
Test base:Chromosome-wise
Threshold significance level:Significant
P_values0.0015
Dominance effect:n/a
Additive effect:n/a
Associated Gene:LEPR (leptin receptor)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #4967
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:An Iberian x Landrace population was used.
     Breeds associated:
    Design:Animals were genotyped for 13 microsatellite markers on chromosome 6 and analyzed for body composition traits.
    Analysis:A mixed model, a multitrait model, and a single-trait model were utilized.
    Software:CRIMAP v. 2.4, QXPAK
    Notes: 
    Links:Edit

     Reference
    Authors:Ovilo, C; Fernandez, A; Noguera, J L; Barragan, C; Leton, R; Rodriguez, C; Mercade, A; Alves, E; Folch, J M; Varona, L; Toro, M
    Affiliation:SGIT-INIA, Madrid, Spain; Centre UdL-IRTA, Lleida, Spain; CNIO, Madrid, Spain; Facultat de Veterinaria, UAB, Barcelona, Spain
    Title:Fine mapping of porcine chromosome 6 QTL and LEPR effects on body composition in multiple generations of an Iberian by Landrace intercross.
    Journal:Genetical research, 2005, 85 (1): 57-67
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #16089036
  • Add your comments
  • Note similar findings
  • Note contradictions
  • Cite this Data:

    Animal QTLdb: QTL4967 was published in 2005, and was curated into QTLdb on 2009-07-28. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:4967

     

    © 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team