| QTL Map Information |
|---|
| Chromosome: | 2 |
| QTL Peak Location: | 57.9 (cM) |
| QTL Span: | 50.3-65.1 (cM)
41.7-86.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | |
| Analysis type: | QTL |
| Model tested: | n/a |
| Test base: | n/a |
| Threshold significance level: | n/a |
 |
F_Stat | 6.14 | | P_values | <0.05 | | Dominance effect: | -0.005 |
| Additive effect: | -0.14 |
| Associated Gene: | CAST (calpastatin) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were from a Berkshire x Yorkshire cross. |
| Breeds associated:
n/a
|
| Design: | Animals were genotyped for a number of microsatellite markers in the region of the calpastatin gene on chromosome 2, and meat quality measures were assessed. |
| Analysis: | Calpastatin haplotypes were constructed and used for association analyses with meat quality traits. |
| Software: | SAS, CRI-MAP |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Ciobanu, D C; Bastiaansen, J W M; Lonergan, S M; Thomsen, H; Dekkers, J C M; Plastow, G S; Rothschild, M F |
| Affiliation: | Department of Animal Science, Iowa State University, Ames, IA, USA; Sygen International, Franklin, KY, USA; Sygen International, Rosmalen, The Netherlands; Sygen International, Kingston Bagpuize, UK |
| Title: | New alleles in calpastatin gene are associated with meat quality traits in pigs. |
| Journal: | J Anim Sci, 2004, 82 (10): 2829-39 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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