Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 3798 Description:

 Trait Information
Trait name: Subcutaneous fat thickness Vertebrate Trait Ontology: Subcutaneous adipose thickness
Trait details: tenth-rib backfat Product Trait Ontology: n/a
Symbol: 10RIBBFT Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:2
QTL Peak Location:5 (cM)
QTL Span:0-31.2 (cM)
0.6-13.4 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":SW2443
Peak:
Lower, "Significant":SW2445
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:QTL
Model tested:n/a
Test base:Genome-wise
Threshold significance level:Significant
F_Stat18.8
P_values<0.01
Dominance effect:n/a
Additive effect:0.13
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #3798
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  •  QTL Experiment in Brief
    Animals:A three-generation resource family was created by crossing two Berkshire sires with nine Yorkshire dams.
     Breeds associated:
    n/a
    Design:Animals were genotyped for 158 microsatellite markers. Data was collected on 39 traits related to growth, carcass composition, and meat quality.
    Analysis:A series of statistical tests were applied to detect QTL with parent-of-origin effects.
    Software:CRI-MAP
    Notes: 
    Links:Edit

     Reference
    Authors:Thomsen, H; Lee, H K; Rothschild, M F; Malek, M; Dekkers, J C M;
    Affiliation:Department of Animal Science and the Center for Integrated Animal Genomics, Iowa State University, Ames, IA
    Title:Characterization of quantitative trait loci for growth and meat quality in a cross between commercial breeds of swine.
    Journal:J Anim Sci, 2004, 82 (8): 2213-28
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:Paternal expression.
    User inputs on reference #15318717
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  • Cite this Data:

    Animal QTLdb: QTL3798 was published in 2004, and was curated into QTLdb on 2008-11-21. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:3798

     

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