Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 366 Description:

 Trait Information
Trait name: Longissimus muscle depth Vertebrate Trait Ontology: Longissimus thoracis muscle thickness
Reported name: Loin muscle depth Product Trait Ontology: n/a
Symbol: LMDEP Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:7
QTL Peak Location:61.5 (cM)
QTL Span:30.2-81.5 (cM)
11.6-55.9 (Mbp)
Upper, "Suggestive":SW1354
Upper, "Significant":S0064
Peak:SW1856
Lower, "Significant":SW175
Lower, "Suggestive":SW352
Marker type:Microsatellites
Analysis type:QTL
Model tested:Maternally imprinted
Test base:n/a
Threshold significance level:n/a
F_Stat50.33
Dominance effect:n/a
Additive effect:-1.69
Associated Gene:n/a
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Meishan boar and Dutch sows were crossed to produce F1; ramdomly selected F1 pigs were used to produce F2.
     Breeds associated:
    n/a
    Design:Whole genome scan with 132 MS markers covering 90% of the porcine genome
    Analysis:Use model for imprinting to test parternal or maternal effects. F-statistics was used to evaluate the significance of each component.
    Software: 
    Notes: 
    Links:Edit

     Reference
    Authors:de Koning DJ, Rattink AP, Harlizius B, van Arendonk JA, Brascamp EW, Groenen MA.
    Affiliation:Animal Breeding and Genetics Group, Wageningen Institute of Animal Sciences,Wageningen University, P.O. Box 338, 6700 AH Wageningen, The Netherlands.
    Title:Genome-wide scan for body composition in pigs reveals important role of imprinting.
    Journal:Proc Natl Acad Sci U S A., 2000, Jul 5;97(14):7947-50.
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #10859367
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  • Cite this Data:

    Animal QTLdb: QTL366 was published in 2000, and was curated into QTLdb on 2011-11-11. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:366

     

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