Release 56
(Apr 24, 2025)

QTL 315810 Description:

 Trait Information
Trait name: Intramuscular fat content Vertebrate Trait Ontology: Intramuscular adipose amount
Reported name: (n/a) Product Trait Ontology: Intramuscular fat content
Symbol: IMF Clinical Measurement Ontology: Intramuscular fat morphological measurement
 QTL Map Information
Chromosome:4
QTL Peak Location:n/a
QTL Span:n/a
98.4-98.4 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs80931414
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:-
Test base:-
Threshold significance level:Significant
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:CTSS (cathepsin S)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Duroc-Landrace-Yorkshire pigs.
     Breeds associated:
    Design:Pigs were genotyped for a SNP in the CTSS gene, and association analysis was performed for intramuscular fat content and backfat thickness.
    Analysis:One-way ANOVA with Sidak's multiple comparison test was used.
    Software:GraphPad Prism
    Notes: 
    Links:Edit

     Reference
    Authors:Tian Y, Zhao Y, Yao Y, Li M, Zhang L, Wei W, Chen J
    Affiliation:College of Animal Science and Technology, Nanjing Agricultural University, Nanjing, China
    Title:Genetic and functional validation of CTSS in regulating intramuscular fat content of Duroc-Landrace-Yorkshire pigs
    Journal:Animal Genetics, 2025, 56(2): e70010
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #40251967
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  • Cite this Data:

    Animal QTLdb: QTL315810 was published in 2025, and was curated into QTLdb on 2025-04-22. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:315810

     

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