| QTL Map Information |
|---|
| Chromosome: | 6 |
| QTL Peak Location: | 52.28 (cM) |
| QTL Span: | 52.28-52.28 (cM)
53.6-53.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs81308021 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | n/a |
| Threshold significance level: | n/a |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were purebred and crossbred boars of unspecified breeds. |
| Breeds associated:
n/a
|
| Design: | Animals were genotyped using the Illumina PorcineSNP60 BeadChip and analyzed for androstenone level. A total of 46,421 SNPs were used for analysis. |
| Analysis: | One model for single-SNP regression was fitted, including both the direct effect of the individual and the summed indirect effects of its pen mates. |
| Software: | ASReml, GenABEL in R, PLINK |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Duijvesteijn N, Knol E F, Bijma P |
| Affiliation: | Animal Breeding and Genomics Centre, Wageningen University, PO Box 338, 6700 AH Wageningen, The Netherlands |
| Title: | Boar taint in entire male pigs: A genomewide association study for direct and indirect genetic effects on androstenone |
| Journal: | Journal of animal science, 2014, 92(10): 4319-28 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Direct effect |
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