Release 56
(Apr 24, 2025)

QTL 31316 Description:

 Trait Information
Trait name: Subcutaneous fat thickness Vertebrate Trait Ontology: Subcutaneous adipose thickness
Trait details: backfat thickness at sacrum 2 Product Trait Ontology: n/a
Symbol: LUMBF Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:5
QTL Peak Location:0.6 (cM)
QTL Span:1.83-1.93 (cM)
2.1-2.3 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:-
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values0.04
Dominance effect:n/a
Additive effect:n/a
Associated Gene:PPARA (peroxisome proliferator-activated receptor alpha)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Pietrain, Duroc, Polish Large White, and Polish Landrace gilts.
     Breeds associated:
    Design:Animals were genotyped for SNPs in PPARA and analyzed for either fatty acid content or carcass traits.
    Analysis:Linear mixed effect models were used.
    Software: 
    Notes: 
    Links:Edit

     Reference
    Authors:Stachowiak M, Szydlowski M, Flisikowski K, Flisikowska T, Bartz M, Schnieke A, Switonski M
    Affiliation:Department of Genetics and Animal Breeding, Poznan University of Life Sciences, Wolynska 33, 60-637 Poznan, Poland
    Title:Polymorphism in 3' untranslated region of the pig PPARA gene influences its transcript level and is associated with adipose tissue accumulation
    Journal:Journal of animal science, 2014, 92(6): 2363-71
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:c.*636A>G
    User inputs on reference #24671595
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  • Cite this Data:

    Animal QTLdb: QTL31316 was published in 2014, and was curated into QTLdb on 2014-11-05. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:31316

     

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