| QTL Map Information |
|---|
| Chromosome: | 14 |
| QTL Peak Location: | 89.2 (cM) |
| QTL Span: | 98.02-98.06 (cM)
142.5-142.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
LikelihoodR | 48.0 | | VARIANCE | 27.1 | | P_values | 3.8E-11 | | Dominance effect: | -0.10 |
| Additive effect: | 1.22 |
| Associated Gene: | SCD (stearoyl-CoA desaturase (delta-9-desaturase)) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Duroc pigs. |
| Breeds associated:
|
| Design: | Animals were genotyped for SNPs in SCD and 19 microsatellites on SSC14 and analyzed for fatty acid composition |
| Analysis: | Linkage analysis and a pedigree-based multipoint variance components analysis were performed. For candidate gene analysis, a mixed-inheritance animal model was used. |
| Software: | SOLAR, Qxpak |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Uemoto Y, Nakano H, Kikuchi T, Sato S, Ishida M, Shibata T, Kadowaki H, Kobayashi E, Suzuki K |
| Affiliation: | National Livestock Breeding Center, Nishigo, Fukushima, Japan |
| Title: | Fine mapping of porcine SSC14 QTL and SCD gene effects on fatty acid composition and melting point of fat in a Duroc purebred population |
| Journal: | Animal genetics, 2012, 43(2): 225-8 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Outer subcutaneous fat |
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