Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 3042 Description:

 Trait Information
Trait name: Scrotal/inguinal hernia Vertebrate Trait Ontology: Inguinal canal integrity trait
Reported name: Inguinal hernia Product Trait Ontology: n/a
Symbol: IHERN Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:2
QTL Peak Location:128.2 (cM)
QTL Span:121.42-121.56 (cM)
151.4-151.9 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:SWR308
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:QTL
Model tested:n/a
Test base:n/a
Threshold significance level:n/a
P_values0.01
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:There were 151 Norwegian Landrace pigs and 78 Danish Landrace pigs, for a total of 194 pigs used in this study.
     Breeds associated:
    n/a
    Design:The aim of this study was to identify genomic regions affecting the frequency of inguinal and scrotal hernias in pigs.
    Analysis:The linkage analysis was performed using an affected sib pair (ASP) test. 137 microsatellite markers were chosen from the USMARC Genome Database.
    Software:Genescan, Genotyper 3.7, and GeneMapper 3.0
    Notes: 
    Links:Edit

     Reference
    Authors:Eli Grindflek, Maren Moe, Helge Taubert, Henner Simianer, Sigbjorn Lien, Thomas Moen
    Affiliation:The Norwegian Pig Breeders Association, Hamar, Norway; Norwegian University of Life Scinces, Aas, Norway; Georg-August University of Goettingen, Goettingen, Germany; AKVAFORSK, Aas, Norway
    Title:Genome-wide linkage analysis of inguinal hernia in pigs using affected sib pairs
    Journal:BMC genetics, 2006, 7: 25-36
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #16672048
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  • Cite this Data:

    Animal QTLdb: QTL3042 was published in 2006, and was curated into QTLdb on 2006-12-21. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:3042

     

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