Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 300 Description:

 Trait Information
Trait name: Muscle pH Vertebrate Trait Ontology: Muscle pH regulation trait
Trait details: pH 24 hr post-mortem (longissimus thoracis) Product Trait Ontology: Meat pH
Symbol: MPH Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:3
QTL Peak Location:33 (cM)
QTL Span:17.3-52.4 (cM)
13.9-49.1 (Mbp)
Upper, "Suggestive":SW833
Upper, "Significant":n/a
Peak:SE47329
Lower, "Significant":n/a
Lower, "Suggestive":SW139
Marker type:Microsatellites
Analysis type:QTL
Model tested:n/a
Test base:n/a
Threshold significance level:n/a
F_Stat7.73
P_values0.0800
Dominance effect:0.04
Additive effect:0.11
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Iberian pigs mated Landrace pigs to produce F1. 6 X 72 F1 produced 577 F2 for QTL mapping purpose.
     Breeds associated:
    n/a
    Design:Eight meat quality traits measured and 90 genetic markers were genotyped for QTL analysis.
    Analysis:Least square interval mapping was used to locate QTL in a fixed model.
    Software:Haley's QTLprogram; CRIMAP 2.4
    Notes: 
    Links:Edit

     Reference
    Authors:Ovilo C, Clop A, Noguera JL, Oliver MA, Barragan C, Rodriguez C, Silio L, ToroMA, Coll A, Folch JM, Sanchez A, Babot D, Varona L
    Affiliation:Departamento de Mejora Genetica Animal, INIA, Carretera La Coruna km 7, 28040Madrid, Spain. ovilo@inia.es
    Title:Quantitative trait locus mapping for meat quality traits in an Iberian xLandrace F2 pig population.
    Journal:J Anim Sci, 2002, Nov;80(11):2801-8.
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #12462246
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  • Cite this Data:

    Animal QTLdb: QTL300 was published in 2002, and was curated into QTLdb on 2003-12-20. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:300

     

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