Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 2966 Description:

 Trait Information
Trait name: Average glycogen Vertebrate Trait Ontology: Muscle glycogen amount
Reported name: Average glycogen Product Trait Ontology: n/a
Symbol: GLY Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:15
QTL Peak Location:83 (cM)
QTL Span:79.3-86.3 (cM)
127.9-133.0 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":SW120
Peak:
Lower, "Significant":RN
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:QTL
Model tested:n/a
Test base:n/a
Threshold significance level:n/a
P_values0.033
Dominance effect:0.24
Additive effect:-0.23
Associated Gene:IL1B (interleukin 1, beta)
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #2966
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:A three generation resource family was developed from a cross between two purebred Berkshire sires and nine Yorkshire dams.
     Breeds associated:
    n/a
    Design:The analysis was done for growth, carcass composition and meat quality in the cross.
    Analysis:A combined model based on the framework of the line-cross and half-sib least-squares regression interval mapping models was used.
    Software:Cri-Map 2.4
    Notes: 
    Links:Edit

     Reference
    Authors:Jong-Joo Kim, Honghua Zhao, Hauke Thomsen, Max F. Rothschild, Jack C.M. Dekkers
    Affiliation:Iowa State University, Ames, IA, USA
    Title:Combined line-cross and half-sib QTL analysis of crosses between outbred lines
    Journal:Genetical Research, 2005, 85: 235-248
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #16174342
  • Add your comments
  • Note similar findings
  • Note contradictions
  • Cite this Data:

    Animal QTLdb: QTL2966 was published in 2005, and was curated into QTLdb on 2006-12-19. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:2966

     

    © 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team