Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 284 Description:

 Trait Information
Trait name: Spotted coat Vertebrate Trait Ontology: Coat/hair pigmentation trait
Reported name: Spotted coat Product Trait Ontology: n/a
Symbol: CCOLOR Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:6
QTL Peak Location:15.90 (cM)
QTL Span:12.82-18.98 (cM)
8.9-9.9 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:S0099
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:
Analysis type:QTL
Model tested:n/a
Test base:n/a
Threshold significance level:n/a
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #284
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  •  QTL Experiment in Brief
    Animals:n/a
     Breeds associated:
    n/a
    Design:PCR-RFLP and ISH were used to map MC1R gene.
    Analysis:Linkage analysis.
    Software:CRIMAP 2.4
    Notes:MC1R is mapped to chromosome 6, linked with S0011.
    Links:Edit

     Reference
    Authors:Kijas JM, Wales R, Tornsten A, Chardon P, Moller M, Andersson L.
    Affiliation:Department of Animal Breeding and Genetics, Swedish University of AgriculturalSciences, S-751 24, Uppsala, Sweden.
    Title:Melanocortin receptor 1 (MC1R) mutations and coat color in pigs.
    Journal:Genetics, 1998, Nov;150(3):1177-85.
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:Additional evidence confirms that MC1R is a causitive gene for coat color, by publication #11404341 (PUBMED_ID)
    User inputs on reference #9799269
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  • Cite this Data:

    Animal QTLdb: QTL284 was published in 1998, and was curated into QTLdb on 2003-12-20. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:284

     

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