Release 56
(Apr 24, 2025)

QTL 282940 Description:

 Trait Information
Trait name: Subcutaneous fat thickness Vertebrate Trait Ontology: Subcutaneous adipose thickness
Trait details: tenth rib backfat Product Trait Ontology: n/a
Symbol: SUBCFAT Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:7
QTL Peak Location:n/a
QTL Span:n/a
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs80875831
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:n/a
Test base:n/a
Threshold significance level:Significant
P_values<0.01
Dominance effect:n/a
Additive effect:n/a
Associated Gene:GPX2 (glutathione peroxidase 2)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #282940
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were Duroc pigs.
     Breeds associated:
    Design:Pigs were genotyped for SNPs in the GPX2 gene, and association analysis was performed for growth and production traits.
    Analysis:A least-squares method, applied in the generalized linear mixed model, was used for analysis.
    Software:Haploview 4.2, SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Pu L, Luo Y, Wen Z, Dai Y, Zheng C, Zhu X, Qin L, Zhang C, Liang H, Zhang J, Guo L, Wang L
    Affiliation:Tianjin Key Laboratory of Agricultural Animal Breeding and Healthy Husbandry, College of Animal Science and Veterinary Medicine, Tianjin Agricultural University, Tianjin 300384, China
    Title:GPX2 Gene Affects Feed Efficiency of Pigs by Inhibiting Fat Deposition and Promoting Muscle Development
    Journal:Animals : an open access journal from MDPI, 2022, 12(24):3528
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #36552449
  • Add your comments
  • Note similar findings
  • Note contradictions
  • Cite this Data:

    Animal QTLdb: QTL282940 was published in 2022, and was curated into QTLdb on 2023-07-13. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:282940

     

    © 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team