| QTL Map Information |
|---|
| Chromosome: | 13 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
194.6-194.6 (Mbp) |
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs325736804 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | <1.03E-7 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Yorkshire, Landrace, and Duroc sows. |
| Breeds associated:
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| Design: | Animals were genotyped using the GeneSeek Genomic Profiler Porcine 50K Chip, with data imputed to whole-genome level, and GWAS was performed for gestation length. A total of 9,212,179 SNPs were used for analysis. |
| Analysis: | GWAS was conducted using the following model:
y = μ + bX + G + F + P + m × M + e |
| Software: | DMU v.6.5.1, PLINK, PHARP v1, GCTA, vcftools |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Shi L, Li H, Wang L |
| Affiliation: | Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China |
| Title: | Genetic parameters estimation and genome molecular marker identification for gestation length in pigs |
| Journal: | Frontiers in Genetics, 2022, 13: 1046423 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | imputed SNP analysis |
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