Release 56
(Apr 24, 2025)

QTL 24115 Description:

 Trait Information
Trait name: Relative area of type IIa fibers Vertebrate Trait Ontology: Skeletal muscle fiber size trait
Reported name: Relative area of type IIa fibers Product Trait Ontology: n/a
Symbol: RAFIB2A Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:17
QTL Peak Location:96.4 (cM)
QTL Span:97.74-98.16 (cM)
68.4-68.6 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values0.033
Dominance effect:n/a
Additive effect:n/a
Associated Gene:MIR1 (microRNA mir-1)
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Berkshire, Landrace, and Yorkshire pigs.
     Breeds associated:
    Design:Animals were genotyped for two SNPs in miR-1 and analyzed for muscle fiber and meat quality traits.
    Analysis:The general linear model procedure was used.
    Software:SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Hong JS, Noh SH, Lee JS, Kim JM, Hong KC, Lee YS
    Affiliation:College of Life Sciences and Biotechnology, Korea University, Seoul 136-713, South Korea
    Title:Effects of polymorphisms in the porcine microRNA miR-1 locus on muscle fiber type composition and miR-1 expression
    Journal:Gene, 2012, 506(1): 211-6
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:g.[123485C>T; 123287G>A]
    User inputs on reference #22750317
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  • Cite this Data:

    Animal QTLdb: QTL24115 was published in 2012, and was curated into QTLdb on 2014-02-17. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:24115

     

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