| QTL Map Information |
|---|
| Chromosome: | 15 |
| QTL Peak Location: | 104.9 (cM) |
| QTL Span: | 114.63-114.66 (cM)
145.2-145.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 0.04 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | PRKAG3 (protein kinase, AMP-activated, gamma 3 non-catalytic subunit) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were cross-bred (Large White, Duroc, or Pietrain-sired with common Large White x Landrace background) or purebred (Large White, Duroc, and Pietrain) pigs. |
| Breeds associated:
|
| Design: | Animals were genotyped for variants in PRKAG3 and analyzed for meat quality traits. |
| Analysis: | A least-squares method was used. |
| Software: | Haploview, PASW Statistics 18.0, SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Ryan MT, Hamill RM, O'Halloran AM, Davey GC, McBryan J, Mullen AM, McGee C, Gispert M, Southwood OI, Sweeney T |
| Affiliation: | School of Veterinary Medicine, University College Dublin, Belfield, Dublin 4, Ireland |
| Title: | SNP variation in the promoter of the PRKAG3 gene and association with meat quality traits in pig |
| Journal: | BMC genetics, 2012, 13: 66 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | in LD |
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