Release 56
(Apr 24, 2025)

QTL 23087 Description:

 Trait Information
Trait name: Subcutaneous fat thickness Vertebrate Trait Ontology: Subcutaneous adipose thickness
Trait details: backfat thickness at first rib Product Trait Ontology: n/a
Symbol: SUBCFAT Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:18
QTL Peak Location:18.6 (cM)
QTL Span:21.88-22.27 (cM)
20.3-20.8 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:-
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values0.03
Dominance effect:0.11
Additive effect:0.01
Associated Gene:LEP (leptin)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Iberian x Landrace pigs.
     Breeds associated:
    Design:Animals were genotyped for three SNPs in LEP and one in LEPR and analyzed for growth, fatness, and fatty acid composition traits.
    Analysis:An animal model was used.
    Software:QXPAK
    Notes: 
    Links:Edit

     Reference
    Authors:Perez-Montarelo D, Fernandez A, Folch J M, Pena R N, Ovilo C, Rodriguez C, Silio L, Fernandez A I
    Affiliation:Department Mejora Genetica Animal, INIA, 28040, Madrid, Spain.
    Title:Joint effects of porcine leptin and leptin receptor polymorphisms on productivity and quality traits
    Journal:Animal genetics, 2012, 43 (6): 805-9
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:g.1387C>T
    User inputs on reference #22497241
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  • Cite this Data:

    Animal QTLdb: QTL23087 was published in 2012, and was curated into QTLdb on 2013-12-13. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:23087

     

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