Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 21377 Description:

 Trait Information
Trait name: Subcutaneous fat thickness Vertebrate Trait Ontology: Subcutaneous adipose thickness
Trait details: last-rib backfat Product Trait Ontology: n/a
Symbol: SUBCFAT Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:6
QTL Peak Location:126.6 (cM)
QTL Span:121.1-149.8 (cM)
94.4-146.4 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":SW1881
Peak:
Lower, "Significant":SW322
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:QTL
Model tested:Mendelian
Test base:Comparison-wise
Threshold significance level:Significant
P_values3.39E-8
Dominance effect:-1.62
Additive effect:1.28
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #21377
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  •  QTL Experiment in Brief
    Animals:Animals were from a Duroc x Pietrain F2 resource population.
     Breeds associated:
    Design:Animals were genotyped for 144 microsatellite markers and analyzed for carcass and meat quality traits.
    Analysis:Three different least-squares models were used: line-cross model, half-sib model, and combined line-cross and half-sib model.
    Software:QTL Express
    Notes: 
    Links:Edit

     Reference
    Authors:Choi I, Steibel JP, Bates RO, Raney NE, Rumph JM, Ernst CW
    Affiliation:Department of Animal Science, Michigan State University East Lansing, MI, USA.
    Title:Identification of Carcass and Meat Quality QTL in an F(2) Duroc x Pietrain Pig Resource Population Using Different Least-Squares Analysis Models.
    Journal:Frontiers in genetics, 2011, 2: 18
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:Line cross
    User inputs on reference #22303314
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  • Cite this Data:

    Animal QTLdb: QTL21377 was published in 2011, and was curated into QTLdb on 2013-07-09. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:21377

     

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