Release 56
(Apr 24, 2025)

QTL 16994 Description:

 Trait Information
Trait name: Ham weight Vertebrate Trait Ontology: Hindlimb mass
Reported name: Ham weight Product Trait Ontology: Ham weight
Symbol: HAMWT Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:7
QTL Peak Location:35 (cM)
QTL Span:18.47-18.62 (cM)
9.5-9.7 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Suggestive
P_values<0.1
Dominance effect:0.030
Additive effect:0.202
Associated Gene:BMP5 (bone morphogenetic protein 5)
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were from a cross between Meishan and Large White pigs.
     Breeds associated:
    Design:Animals were genotyped for a SNP in BMP5 and analyzed for fat deposition and carcass traits.
    Analysis:A least-squares method as applied in the general linear model procedure was used.
    Software:SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Shao GC, Luo LF, Jiang SW, Deng CY, Xiong YZ, Li FE
    Affiliation:Key Laboratory of Pig Genetics and Breeding, Ministry of Agriculture, Huazhong Agricultural University, Wuhan 430070, PR China.
    Title:A C/T mutation in microRNA target sites in BMP5 gene is potentially associated with fatness in pigs.
    Journal:Meat science, 2011, 87(3): 299-303
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:SNP *131C>T
    User inputs on reference #21093991
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  • Cite this Data:

    Animal QTLdb: QTL16994 was published in 2011, and was curated into QTLdb on 2012-07-31. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:16994

     

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