Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 16939 Description:

 Trait Information
Trait name: Subcutaneous fat thickness Vertebrate Trait Ontology: Subcutaneous adipose thickness
Trait details: 22-week 10th-rib backfat Product Trait Ontology: n/a
Symbol: 10RIBBFT Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:15
QTL Peak Location:80 (cM)
QTL Span:79.3-89.3 (cM)
127.9-135.9 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":SW1683
Peak:
Lower, "Significant":SW906
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:QTL
Model tested:Mendelian
Test base:Comparison-wise
Threshold significance level:Significant
P_values3.72E-5
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #16939
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  •  QTL Experiment in Brief
    Animals:Animals were from a Duroc x Pietrain cross.
     Breeds associated:
    Design:Animals were genotyped for 136 microsatellite markers and analyzed for growth traits.
    Analysis:Three least-squares Mendelian models were used: a line-cross model, a half-sib model, and a combined line-cross and half-sib model.
    Software:CRIMAP, QTL Express
    Notes: 
    Links:Edit

     Reference
    Authors:Choi I, Steibel JP, Bates RO, Raney NE, Rumph JM, Ernst CW
    Affiliation:Department of Animal Science, Michigan State University, East Lansing, Michigan, USA
    Title:Application of alternative models to identify QTL for growth traits in an F2 Duroc x Pietrain pig resource population.
    Journal:BMC genetics, 2010, 11: 97
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:half-sib
    User inputs on reference #21040587
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  • Cite this Data:

    Animal QTLdb: QTL16939 was published in 2010, and was curated into QTLdb on 2012-05-04. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:16939

     

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