| QTL Map Information |
|---|
| Chromosome: | 5 |
| QTL Peak Location: | 0.00 (cM) |
| QTL Span: | 0.00-0.00 (cM)
69.3-69.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs80858007 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 8.58E-06 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Alentejano, a strain of Iberian pigs from South Portugal. |
| Breeds associated:
n/a
|
| Design: | Animals were genotyped using the Illumina PorcineSNP60 v2 BeadChip and analyzed for 153 traits related to carcass quality, cuts, meat quality, fatty acid composition, and metabolic indices. A total of 31,434 SNPs were used for analysis. |
| Analysis: | A principal component analysis method was used. |
| Software: | GenABEL in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Amaral AJ, Bressan MC, Almeida J, Bettencourt C, Moreira O, Sá J, Gama-Carvalho M, Bessa R, Gama LT |
| Affiliation: | Centre for Interdisciplinary Research in Animal Health, Faculty of Veterinary Medicine, University of Lisbon, Lisbon, Portugal |
| Title: | Combining genome-wide association analyses and gene interaction networks to reveal new genes associated with carcass traits, meat quality and fatty acid profiles in pigs |
| Journal: | Livestock Science, 2019, 220:180-189 |
| Links: |
No PubMed entry | Abstract | List all data
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| Additional Information |
|---|
| Comments: | intramuscular fat |
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