Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 12717 Description:

 Trait Information
Trait name: External fat on ham Vertebrate Trait Ontology: n/a
Reported name: External fat on ham Product Trait Ontology: Ham external fat weight
Symbol: EFATHAM Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:1
QTL Peak Location:77.8 (cM)
QTL Span:73-79.4 (cM)
169.1-233.8 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":SW307
Peak:
Lower, "Significant":S0082
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:QTL
Model tested:Mendelian
Test base:Genome-wise
Threshold significance level:Significant
F_Stat20.7
VARIANCE11.5
P_values<0.01
Dominance effect:0.04
Additive effect:-0.26
Associated Gene:n/a
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #12717
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were from three crosses between Pietrain, Meishan, and European wild boar.
     Breeds associated:
    Design:Animals were genotyped for between 169 and 216 polymorphic markers and analyzed for fatness and characteristics of fat cells/tissue.
    Analysis:A least-square method was used.
    Software:CRIMAP
    Notes: 
    Links:Edit

     Reference
    Authors:Geldermann, H; Cepica, S; Stratil, A; Bartenschlager, H; Preuss, S
    Affiliation:Animal Breeding and Biotechnology, University of Hohenheim, Stuttgart, Germany
    Title:Genome-wide mapping of Quantitative Trait Loci for fatness, fat cell characteristics and fat metabolism in three porcine F2 crosses.
    Journal:Genetics, Selection, Evolution : GSE, 2010, 42(1): 31
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #20667088
  • Add your comments
  • Note similar findings
  • Note contradictions
  • Cite this Data:

    Animal QTLdb: QTL12717 was published in 2010, and was curated into QTLdb on 2010-09-21. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:12717

     

    © 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team