Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 1271 Description:

 Trait Information
Trait name: Ham fat weight Vertebrate Trait Ontology: n/a
Reported name: Ham fat weight Product Trait Ontology: Ham fat weight
Symbol: HFATW Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:1
QTL Peak Location:81 (cM)
QTL Span:80.5-81.6 (cM)
168.7-210.6 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":S0113
Peak:SW1431
Lower, "Significant":SPIPSU
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:QTL
Model tested:n/a
Test base:n/a
Threshold significance level:n/a
F_Stat8.4
VARIANCE0.16
Dominance effect:0.08
Additive effect:0.16
Associated Gene:n/a
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:462 animals from a combined intercross and backcross between Hampshire and Landrace pigs.
     Breeds associated:
    n/a
    Design:Several precisely defined muscle phenotypes were measured in order to dissect body composition in more detail. Three significant QTL were detected in the study at the 1% genome-wide level, and twelve significant QTL were detected at the 5% genome-wid
    Analysis:Data were analysed using multiple linear regression fitting additive and dominance effects. This model was compared with a model including a parent-of-origin effect to spot evidence of imprinting.
    Software: 
    Notes: 
    Links:Edit

     Reference
    Authors:P. Karlskov-Mortensen,C. S. Bruun, M. H. Braunschweig, M. Sawera, E. Markljung, A. C. Enfalt, I. Hedebro-Velander, A . Josell, G
    Affiliation:The Royal Veterinary and Agriculture University, Frederiksberg, Denmark; Swedish University of Agricultural Sciences, Uppsala, Sweden; University of Berne, Berne, Switzerland; Uppsala University, Uppsala, Sweden; Quality Genetics, Ka
    Title:Genome-wide identification of quantitative trait loci in a cross between Hampshire and Landrace I: carcass traits
    Journal:Animal Genetics, 2005, Volume 10 Issue 1111
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #16573530
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  • Cite this Data:

    Animal QTLdb: QTL1271 was published in 2005, and was curated into QTLdb on 2009-05-21. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:1271

     

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