Release 56
(Apr 24, 2025)

QTL 12652 Description:

 Trait Information
Trait name: Marbling Vertebrate Trait Ontology: Intramuscular adipose amount
Reported name: Marbling Product Trait Ontology: Intramuscular fat content
Symbol: MARB Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:17
QTL Peak Location:87.4 (cM)
QTL Span:91.93-92.04 (cM)
64.0-64.1 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values<0.04
Dominance effect:n/a
Additive effect:n/a
Associated Gene:MC3R (melanocortin 3 receptor)
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were from a Berkshire x Yorkshire cross or from commercial lines consisting of Landrace, Large White, Duroc, and Berkshire.
     Breeds associated:
    Design:Animals were genotyped for polymorphisms in GHRL, HMGA1, HMGA2, and MC3R and analyzed for fat deposition and obesity-related traits.
    Analysis:A mixed model was used.
    Software:CRIMAP, SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Kim KS, Thomsen H, Bastiaansen J, Nguyen NT, Dekkers JC, Plastow GS, Rothschild MF
    Affiliation:Department of Animal Science and Center for Integrated Animal Genomics, Iowa State University, Ames, IA 50011, USA; mfrothsc@iastate.edu
    Title:Investigation of obesity candidate genes on porcine fat deposition quantitative trait loci regions
    Journal:Obes Res, 2004, 12(12): 1981-94
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #15687400
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  • Cite this Data:

    Animal QTLdb: QTL12652 was published in 2004, and was curated into QTLdb on 2012-07-31. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:12652

     

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