Release 56
(Apr 24, 2025)

QTL 11910 Description:

 Trait Information
Trait name: Ham weight Vertebrate Trait Ontology: Hindlimb mass
Reported name: Ham weight (RR) Product Trait Ontology: Ham weight
Symbol: HAMWT Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:2
QTL Peak Location:-2.3 (cM)
QTL Span:n/a
-3.2--2.1 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values0.0354
Dominance effect:n/a
Additive effect:n/a
Associated Gene:CTSD (cathepsin D)
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Large White and Italian Duroc pigs.
     Breeds associated:
    Design:Animals were genotyped for SNPs in IGF2 and CTSD and analyzed for meat, carcass, and production traits.
    Analysis:The general linear model procedure was used.
    Software:SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Fontanesi L, Speroni C, Buttazzoni L, Scotti E, Dall'Olio, S, Costa N, Davoli R, Russo V
    Affiliation:DIPROVAL, Sezione di Allevamenti Zootecnici, Faculty of Agriculture, University of Bologna, Via F.lli Rosselli 107, 42100 Reggio Emilia, Italy; luca.fontanesi@unibo.it
    Title:The insulin-like growth factor 2 (IGF2) gene intron3-g.3072G>A polymorphism is not the only Sus scrofa chromosome 2p mutation affecting meat production and carcass traits in pigs: evidence from the effects of a cathepsin D (CTSD) gene polym
    Journal:J Anim Sci, 2010, 88(7): 2235-45
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:g.70G>A; random residual
    User inputs on reference #20382874
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  • Cite this Data:

    Animal QTLdb: QTL11910 was published in 2010, and was curated into QTLdb on 2010-07-16. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:11910

     

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