| QTL Map Information |
|---|
| Chromosome: | 2 |
| QTL Peak Location: | 75 (cM) |
| QTL Span: | 89.41-90.19 (cM)
132.2-132.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
F_Stat | 16.19 | | P_values | 0.00198 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | CAST (calpastatin) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were from a Duroc-Landrace-Yorkshire population. |
| Breeds associated:
|
| Design: | Animals were genotyped for 40 SNPs on SSC2 and analyzed for shear force. |
| Analysis: | Data were analyzed using an animal model which included fixed effects of sex and harvest date, covariates of SNP regressors and random additive polygenic effects. |
| Software: | MENDEL 8.0.1 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Lindholm-Perry AK, Rohrer GA, Holl JW, Shackelford SD, Wheeler TL, Koohmaraie M, Nonneman D |
| Affiliation: | USDA, ARS, U.S. Meat Animal Research Center, Clay Center, NE, USA; nonneman@ars.usda.gov |
| Title: | Relationships among calpastatin single nucleotide polymorphisms, calpastatin expression and tenderness in pork longissimus |
| Journal: | Animal genetics, 2009, 40(5): 713-21 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | 41658_290i |
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