Release 56
(Apr 24, 2025)

QTL 10604 Description:

 Trait Information
Trait name: Subcutaneous fat thickness Vertebrate Trait Ontology: Subcutaneous adipose thickness
Trait details: backfat thickness, side Product Trait Ontology: n/a
Symbol: BFS Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:6
QTL Peak Location:90.7 (cM)
QTL Span:68.17-68.53 (cM)
29.9-30.0 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:SW1823
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:Association
Model tested:Mendelian
Test base:-
Threshold significance level:Suggestive
P_values0.0742
Dominance effect:n/a
Additive effect:n/a
Associated Gene:NR0B2 (nuclear receptor subfamily 0, group B, member 2)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:A commercial Norwegian three-way pig cross were available for this study, consisting of half-sib families from five Norwegian-Landrace/Duroc sires each mated with eight Norwegian-Landrace/Yorkshire dams.
     Breeds associated:
    Design:Animals were analyzed for association between SNPs in SHP and FABP3 and carcass traits.
    Analysis:The general linear model procedure was performed for the association study. Litter, sex and the SHP haplotypes were included in the analyses as fixed effects.
    Software:CRIMAP, SAS
    Notes: 
    Links:Edit

     Reference
    Authors:M. Arnyasi, E. Grindflek, A. Javor, S. Lien
    Affiliation:University of Debrecen, Debrecen, Hungary; The Norwegian Pig Breeders Association, Hamar, Norway; Norwegian University of Life Sciences, Aas, Norway
    Title:Investigation of two candidate genes for meat quality traits in a quantitative trait locus region on SSC6: the porcine short heterodimer partner and heart fatty acid binding protein genes
    Journal:J Anim Breed Genet, 2006, 123: 198-203
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #16706925
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  • Cite this Data:

    Animal QTLdb: QTL10604 was published in 2006, and was curated into QTLdb on 2012-07-31. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:10604

     

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