Trait centric view

1. Trait name:	Functional teat number
   Ontology terms:	VT:1000637

   1 gene are associated with this trait, with QTL/association found

   • FGF1: Fibroblast growth factor 1
     evidenced by: QTL:124201;
   12 correlations are found involving Functional teat number
    

2. Trait name:	Nonfunctional teat number
   Ontology terms:	VT:1000720

   1 gene are associated with this trait, with QTL/association found

   • CPVL: Carboxypeptidase, vitellogenic like
     evidenced by: QTL:124217; QTL:124218;
   30 correlations are found involving Nonfunctional teat number
    

3. Trait name:	Teat number
   Ontology terms:	VT:1000206, CMO:0000445

   94 genes are associated with this trait, with QTL/association found

   • ABCD4: ATP binding cassette subfamily D member 4
     evidenced by: QTL:211821; QTL:211822; QTL:211823; QTL:211824; QTL:285969; QTL:285971; QTL:285973;
   • ACYP1: Acylphosphatase 1, erythrocyte (common) type
     evidenced by: QTL:95530;
   • AKR1C4: Aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)
     evidenced by: QTL:1107;
   • ANKS6: Ankyrin repeat and sterile alpha motif domain containing 6
     evidenced by: QTL:193565;
   • AREL1: Apoptosis resistant E3 ubiquitin protein ligase 1
     evidenced by: QTL:285492;
   • ARL4C: ADP ribosylation factor like GTPase 4C
     evidenced by: QTL:193564; QTL:193569;
   • ATXN3: Ataxin 3
     evidenced by: QTL:31308;
   • AXL: AXL receptor tyrosine kinase
     evidenced by: QTL:211773;
   • BBOF1: Basal body orientation factor 1
     evidenced by: QTL:211818;
   • C8H4ORF45: Chromosome 8 open reading frame, human C4orf45
     evidenced by: QTL:95534;
   • CDH13: Cadherin 13
     evidenced by: QTL:152733;
   • CDYL2: Chromodomain Y like 2
     evidenced by: QTL:257958;
   • CHST15: Carbohydrate sulfotransferase 15
     evidenced by: QTL:211787;
   • COQ6: Coenzyme Q6, monooxygenase
     evidenced by: QTL:285498;
   • CSMD2: CUB and Sushi multiple domains 2
     evidenced by: QTL:211774;
   • CTNNA3: Catenin alpha 3
     evidenced by: QTL:211785;
   • CYB5B: Cytochrome b5 type B (outer mitochondrial membrane)
     evidenced by: QTL:124203;
   • DCAF5: DDB1 and CUL4 associated factor 5
     evidenced by: QTL:211779;
   • DIO2: Iodothyronine deiodinase 2
     evidenced by: QTL:211837; QTL:211838; QTL:211839; QTL:211840;
   • DLST: Dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)
     evidenced by: QTL:95527;
   • DOCK1: Dedicator of cytokinesis 1
     evidenced by: QTL:211855;
   • DPF3: Double PHD fingers 3
     evidenced by: QTL:220264; QTL:220265;
   • EFCAB14: EF-hand calcium binding domain 14
     evidenced by: QTL:211802;
   • EIF3E: Eukaryotic translation initiation factor 3 subunit E
     evidenced by: QTL:193566;
   • ELOVL2: ELOVL fatty acid elongase 2
     evidenced by: QTL:211803;
   • ESRRB: Estrogen related receptor beta
     evidenced by: QTL:285505;
   • FAM161B: FAM161 centrosomal protein B
     evidenced by: QTL:285494;
   • FAT1: FAT atypical cadherin 1
     evidenced by: QTL:211858;
   • FCF1: FCF1 rRNA-processing protein
     evidenced by: QTL:211828; QTL:211829; QTL:220241; QTL:220242; QTL:220260; QTL:220261; QTL:95524;
   • FGF14: Fibroblast growth factor 14
     evidenced by: QTL:211849;
   • FRAS1: Fraser extracellular matrix complex subunit 1
     evidenced by: QTL:211842;
   • FRMD4A: FERM domain containing 4A
     evidenced by: QTL:193562; QTL:193571; QTL:285507;
   • GCLC: Glutamate-cysteine ligase, catalytic subunit
     evidenced by: QTL:95509;
   • GIMAP2: GTPase, IMAP family member 2
     evidenced by: QTL:211859;
   • GRM1: Glutamate receptor, metabotropic 1
     evidenced by: QTL:31297;
   • HECW1: HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
     evidenced by: QTL:211860;
   • ICK: Intestinal cell (MAK-like) kinase
     evidenced by: QTL:31309;
   • IFT43: Intraflagellar transport 43
     evidenced by: QTL:95532;
   • ITGA11: Integrin subunit alpha 11
     evidenced by: QTL:211761;
   • JAZF1: JAZF zinc finger 1
     evidenced by: QTL:285500;
   • JDP2: Jun dimerization protein 2
     evidenced by: QTL:95531;
   • KATNIP: Katanin interacting protein
     evidenced by: QTL:285491;
   • KDM6B: Lysine demethylase 6B
     evidenced by: QTL:224659;
   • KHDRBS2: KH domain containing, RNA binding, signal transduction associated 2
     evidenced by: QTL:95512; QTL:95513; QTL:95514; QTL:95515; QTL:95516; QTL:95517;
   • KIAA1432: KIAA1432 ortholog
     evidenced by: QTL:31300;
   • KIF6: Kinesin family member 6
     evidenced by: QTL:152737;
   • LEF1: Lymphoid enhancer-binding factor 1
     evidenced by: QTL:65401; QTL:65402; QTL:65403; QTL:65404; QTL:65405;
   • LIN52: Lin-52 DREAM MuvB core complex component
     evidenced by: QTL:211819; QTL:211820;
   • LOC100153159: Tubulointerstitial nephritis antigen-like
     evidenced by: QTL:31306;
   • LOC100515111: Uncharacterized LOC100515111
     evidenced by: QTL:31298;
   • LOC100519853: Zinc finger protein 2 homolog
     evidenced by: QTL:95551;
   • LOC100737487: Ephrin type-A receptor 5-like
     evidenced by: QTL:95556;
   • LOC102159670: Uncharacterized LOC102159670
     evidenced by: QTL:95541;
   • LOC396902: Myosin
     evidenced by: QTL:211856; QTL:211857;
   • LRRN2: Leucine rich repeat neuronal 2
     evidenced by: QTL:285490;
   • LTBP2: Latent transforming growth factor beta binding protein 2
     evidenced by: QTL:285501;
   • METTL16: Methyltransferase like 16
     evidenced by: QTL:95562;
   • MFAP3: Microfibril associated protein 3
     evidenced by: QTL:211792;
   • MLPH: Melanophilin
     evidenced by: QTL:257934;
   • MTUS2: Microtubule associated scaffold protein 2
     evidenced by: QTL:211845; QTL:211846; QTL:211847;
   • NCF4: Neutrophil cytosolic factor 4
     evidenced by: QTL:211770;
   • NELL2: Neural EGFL like 2
     evidenced by: QTL:211771; QTL:257977;
   • NOS2: Nitric oxide synthase 2, inducible
     evidenced by: QTL:257962;
   • NUMB: Numb homolog (Drosophila)
     evidenced by: QTL:211807; QTL:211808; QTL:211809; QTL:211810; QTL:211811; QTL:211812; QTL:211813; QTL:220245; QTL:220246; QTL:220257; QTL:220258;
   • OSBPL3: Oxysterol binding protein like 3
     evidenced by: QTL:257932; QTL:257935;
   • PACC1: Proton activated chloride channel 1
     evidenced by: QTL:257961; QTL:257978;
   • PAFAH1B1: Platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)
     evidenced by: QTL:95564;
   • PDCD11: Programmed cell death 11
     evidenced by: QTL:593;
   • PGAP1: Post-GPI attachment to proteins inositol deacylase 1
     evidenced by: QTL:257966;
   • PGF: Placental growth factor
     evidenced by: QTL:95529;
   • PIWIL1: Piwi like RNA-mediated gene silencing 1
     evidenced by: QTL:211783; QTL:211853;
   • PRIM2: Primase, DNA, polypeptide 2 (58kDa)
     evidenced by: QTL:95519;
   • PRMT8: Protein arginine methyltransferase 8
     evidenced by: QTL:211800; QTL:211801;
   • PROX2: Prospero homeobox 2
     evidenced by: QTL:211831; QTL:220237; QTL:220254; QTL:285489; QTL:95526;
   • PRRC2B: Proline rich coiled-coil 2B
     evidenced by: QTL:211794; QTL:211795;
   • PTGR2: Prostaglandin reductase 2
     evidenced by: QTL:285495;
   • R3HDM4: R3H domain containing 4
     evidenced by: QTL:211765;
   • RANGRF: RAN guanine nucleotide release factor
     evidenced by: QTL:95566;
   • RAPGEF2: Rap guanine nucleotide exchange factor (GEF) 2
     evidenced by: QTL:285506; QTL:95536; QTL:95537; QTL:95538;
   • RASSF6: Ras association domain family member 6
     evidenced by: QTL:124206;
   • RPS6KL1: Ribosomal protein S6 kinase-like 1
     evidenced by: QTL:95528;
   • RUNX1: RUNX family transcription factor 1
     evidenced by: QTL:211852;
   • SDCCAG8: SHH signaling and ciliogenesis regulator SDCCAG8
     evidenced by: QTL:211844;
   • SEPTIN11: Septin 11
     evidenced by: QTL:211841;
   • SH3BGRL2: SH3 domain binding glutamic acid-rich protein like 2
     evidenced by: QTL:31299;
   • SMTNL2: Smoothelin like 2
     evidenced by: QTL:193563;
   • STK31: Serine/threonine kinase 31
     evidenced by: QTL:257967; QTL:257979;
   • TOX3: TOX high mobility group box family member 3
     evidenced by: QTL:220284; QTL:220285;
   • UBE2G1: N/aubiquitin conjugating enzyme E2 G1
     evidenced by: QTL:193568;
   • VRTN: Vertebrae development homolog (pig)
     evidenced by: QTL:193561; QTL:193567; QTL:193570; QTL:211825; QTL:211826; QTL:220275; QTL:220276; QTL:220277; QTL:220278; QTL:220279; QTL:224648; QTL:285972;
   • WNT3: Wnt family member 3
     evidenced by: QTL:211850;
   • WWOX: WW domain containing oxidoreductase
     evidenced by: QTL:257965;
   • ZNF423: Zinc finger protein 423
     evidenced by: QTL:211772;
   • ZNF462: Zinc finger protein 462
     evidenced by: QTL:211762;
   132 correlations are found involving Teat number
    

4. Trait name:	Teat number symmetry
   Ontology terms:	VT:0006078

   1 gene are associated with this trait, with QTL/association found

   • NRP1: Neuropilin 1
     evidenced by: QTL:220266; QTL:220267; QTL:220270;
    

5. Trait name:	Teat number, difference between sides
   Ontology terms:	VT:1000206

   10 genes are associated with this trait, with QTL/association found

   • ADGRV1: Adhesion G protein-coupled receptor V1
     evidenced by: QTL:257938;
   • DNAH12: Dynein axonemal heavy chain 12
     evidenced by: QTL:257946;
   • FAT1: FAT atypical cadherin 1
     evidenced by: QTL:257956;
   • GRIA1: Glutamate ionotropic receptor AMPA type subunit 1
     evidenced by: QTL:257999;
   • KATNIP: Katanin interacting protein
     evidenced by: QTL:257941;
   • MDGA2: MAM domain containing glycosylphosphatidylinositol anchor 2
     evidenced by: QTL:257937;
   • OSBPL6: Oxysterol binding protein like 6
     evidenced by: QTL:257952;
   • PCM1: Pericentriolar material 1
     evidenced by: QTL:258000;
   • RASGRF1: Ras protein specific guanine nucleotide releasing factor 1
     evidenced by: QTL:257991;
   • WWOX: WW domain containing oxidoreductase
     evidenced by: QTL:257989;
    

6. Trait name:	Teat number, maximum per side
   Ontology terms:	VT:1000206

   6 genes are associated with this trait, with QTL/association found

   • HMBOX1: Homeobox containing 1
     evidenced by: QTL:257973;
   • PGAP1: Post-GPI attachment to proteins inositol deacylase 1
     evidenced by: QTL:257974;
   • PROX2: Prospero homeobox 2
     evidenced by: QTL:220250;
   • PSD3: Pleckstrin and Sec7 domain containing 3
     evidenced by: QTL:257975;
   • VRTN: Vertebrae development homolog (pig)
     evidenced by: QTL:220280; QTL:220281; QTL:220282; QTL:220283;
   • WWOX: WW domain containing oxidoreductase
     evidenced by: QTL:257970;