QTL #171921 Description:

 Trait Information
Trait name: Muscle protein content Vertebrate Trait Ontology: Muscle protein amount
Reported name: Product Trait Ontology: Meat protein content
Symbol: MPROTC Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:11
QTL Peak Location:n/a
QTL Span:n/a
8.1-8.1 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Analysis type:Association
Model tested:Mendelian
Test base:-
Threshold significance level:Significant
VARIANCE2.443%
P_valuesn/a
LOD_scoren/a
LS_meann/a
Dominance effect:n/a
Additive effect:n/a
Associated Gene:LOC110536547 (piezo-type mechanosensitive ion channel component 2-like )
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #171921
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Fish were diploid females from a growth-selected line.
     Breeds associated:
    n/a
    Design:Animals were genotyped using an Affymetrix 50K SNP chip and analyzed for filet shear force and protein content.
    Analysis:GWAS was performed using weighted single-step GBLUP with a mixed model.
    Software:AIREMLF90, POSTGSF90, PLINK
    Notes: 
    Links:Edit
     Reference
    Authors:Ali A, Al-Tobasei R, Lourenco D, Leeds T, Kenney B, Salem M
    Affiliation:Computational Science Program, Middle Tennessee State University, Murfreesboro, TN, United States
    Title:Genome-Wide Association Study Identifies Genomic Loci Affecting Filet Firmness and Protein Content in Rainbow Trout
    Journal:Frontiers in genetics, 2019, 10: 386
    Links:  PubMed  |  Abstract   |  List all QTL   |  Edit  

     Additional Information
    Comments:AX-171644934
    User inputs on reference #31130980
  • Add your comments
  • Note similar findings
  • Note contradictions

  • Web Access Statistics © 2003-2019 NAGRP - Bioinformatics Coordination Program.
    Contact: NAGRP Bioinformatics Team
    Helpdesk