Release 56
(Apr 24, 2025)

This linkage-map based data has been obsolete
(see Release notes 51, 52, 53). Information
provided here is only for retrospective online
support of publications that used this data.

QTL 15713 Description:

 Trait Information
Trait name: Spawning date for 4 year old females Vertebrate Trait Ontology: Female reproductive system physiology trait
Reported name: Spawning date for 4 year old females Product Trait Ontology: n/a
Symbol: SPAWNT Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:11
QTL Peak Location:25.9 (cM)
QTL Span:n/a
15.9-16.6 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:Ssa103NVH
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:QTL
Model tested:n/a
Test base:Chromosome-wise
Threshold significance level:Significant
LOD_score5.80
VARIANCE0.257
P_values0.002
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #15713
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  •  QTL Experiment in Brief
    Animals:Fish were from a backcross between two outbred strains of rainbow trout that spawn in different seasons.
     Breeds associated:
    n/a
    Design:Fish were genotyped for 201 microsatellite loci spanning 26 linkage groups and analyzed for spawning date.
    Analysis:Interval mapping analysis was performed.
    Software:LINKMFEX, MAPORD, RECOMDIF, MAPCHART, MultiQTL, SAS
    Notes: 
    Links:Edit

     Reference
    Authors:O'Malley, K G; Sakamoto, T; Danzmann, R G; Ferguson, M M
    Affiliation:Department of Zoology, Univeristy of Guelph, Guelph, Ontario, Canada N1G 2W1
    Title:Quantitative trait loci for spawning date and body weight in rainbow trout: testing for conserved effects across ancestrally duplicated chromosomes.
    Journal:Journal of Heredity, 2006, 94(4): 273-84
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #12920098
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  • Cite this Data:

    Animal QTLdb: QTL15713 was published in 2006, and was curated into QTLdb on 2012-02-09. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:15713

     

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