| QTL Map Information |
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| Chromosome: | 9 |
| QTL Peak Location: | 23.3 (cM) |
| QTL Span: | n/a
11.1-11.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | BX310634 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | Microsatellites |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
LOD_score | 123.3 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
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| QTL Experiment in Brief |
|---|
| Animals: | Rainbow trout were from a cross between the Hofer strain (whirling disease resistant) and the Colorado River strain (whirling disease susceptible). |
| Breeds associated:
n/a
|
| Design: | Fish were genotyped for 21 AFLPs and 122 microsatellite markers and analyzed for whirling disease susceptibility. A subset of the markers were used in families analyzed for QTL confirmation. |
| Analysis: | The non-parametric Kruskal-Wallis test was initially used, followed by interval mapping. |
| Software: | JoinMap 4, XLSTAT, MapQTL |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Baerwald, M R; Petersen, J L; Hedrick, R P; Schisler, G J; May, B |
| Affiliation: | Genomic Variation Laboratory, Department of animal Science, University of California, Davis, CA, USA |
| Title: | A major effect quantitative trait locus for whirling disease resistance identified in rainbow trout (Oncorhynchus mykiss). |
| Journal: | Heredity, 2011, 106(6): 920-6 |
| Links: |
PubMed | Abstract | List all data
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